| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is glnA [H]
Identifier: 116690170
GI number: 116690170
Start: 2389830
End: 2391245
Strand: Reverse
Name: glnA [H]
Synonym: Bcen2424_2149
Alternate gene names: 116690170
Gene position: 2391245-2389830 (Counterclockwise)
Preceding gene: 116690172
Following gene: 116690169
Centisome position: 68.64
GC content: 62.43
Gene sequence:
>1416_bases ATGAGTAAAACCGTCGCCGACGTCATGCAGCTCGTGAAGGACGAGGACGTCAAGTTTGTCGATTTCCGCTTCACGGATAC GCGCGGCAAGGAACAGCACGTGTCGGTGCCGGTTTCGGCGTTTGACGAAGACAAGTTCGAAAGCGGCCATGCATTCGACG GTTCGTCGATCGCGGGCTGGAAGGGCATCGAGGCGTCGGACATGCTGCTCATGCCGGACCCGACCGCTGCCTTCGTCGAC CCGTTCTACGAAGAGTCGACCCTCGTGCTGACCTGCGACGTGGTCGAGCCGGCCGACGGCAAGGGCTACGAGCGCGACCC GCGTTCGCTCGCGAAGCGCGCGGAAGCCTACCTTAAGAGCACGGGTATCGGCGACACGGCGTACTTCGGTCCGGAACCGG AATTCTTCATTTTCGACTCGGTCCAGTGGAACACGGACATGTCGGGCTGCTTCGTGAAGATCAACTCGGAAGAAGCACCG TGGTCGGCCGGCAAGGAATTCGAAGGCGGCAACACCGGCCACCGTCCGGGCACAAAGGGCGGCTACTTCCCGGTCGCGCC GGTCGACACGTTCCAGGACATGCGTTCGGAAATGTGCCTGCTGCTCGAACAGCTCGGCATCCCGGTCGAAGTGCACCACC ACGAAGTGGCGGGCCAGGGCCAGAACGAAATCGGCACGAAGTTCTCGACGCTGGTTCAGCGCGCCGACTGGACGCAATGG TCGAAGTACATCATCCATAACGTCGCGCACTCGTACGGCAAGACGGCGACGTTCATGCCGAAGCCGGTCGTCGGCGACAA CGGTTCGGGCATGCACGTTCACCAGTCGATCTGGAAGGACGGCCAGAACCTGTTCGCGGGCAACGGCTACGCCGGCCTGT CGGAACTGGCGCTGTTCTACATCGGCGGCATCATCAAGCACGCCCGTGCGCTGAACGCGATCACGAACCCGACGACGAAC TCGTACAAGCGTCTGGTCCCGCACTTCGAAGCACCGGTCAAGCTCGCCTACTCGGCACGCAACCGTTCGGCATCGATCCG CATTCCGCACGTGTCGAACCCGAAGGGCCGCCGTATCGAAACGCGCTTCCCGGACCCGATGGCGAACCCGTACCTGTTGT TCTCGGCGCTGATGATGGCCGGCCTCGACGGGATCCAGAACAAGATCCATCCGGGCGAGGCAGCGGACAAGAACCTGTAC GACCTGCCGCCGGAAGAGGATGCAAAGATCCCGACCGTCTGCGCAGGCCTCGACCAGGCACTGGAAGCGCTCGACAAGGA TCGCGAGTTCCTGACCCGTGGCGGCGTGTTCACGGACAGCATGCTCGACGCGTACCTCGCGCTGAAGGAGCAGGAGCTGG CGAAGTTCCGCATGACGACGCACCCGATCGAGTTCGAGATGTACTACTCGCTCTAA
Upstream 100 bases:
>100_bases GTCGAATCGGGGCGCGCTGCGCCAAAGCAAGACCCCGATCAGCTCGATAAACGAGGCGGTTTCCCAGTCCGCCGGAATTG TTCAATCAGGAGAAGAGGTT
Downstream 100 bases:
>100_bases TCGGCGATGGCGCTTCGATTCAGCGCCGTCATGCCGGTTCGTTCCCGTCGCGCGGCTGGCGGCGGGAACGGCGGAGTCTG AAAGGGGACGGCGTCCGGCC
Product: glutamine synthetase, type I
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MSKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGWKGIEASDMLLMPDPTAAFVD PFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKSTGIGDTAYFGPEPEFFIFDSVQWNTDMSGCFVKINSEEAP WSAGKEFEGGNTGHRPGTKGGYFPVAPVDTFQDMRSEMCLLLEQLGIPVEVHHHEVAGQGQNEIGTKFSTLVQRADWTQW SKYIIHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSELALFYIGGIIKHARALNAITNPTTN SYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIETRFPDPMANPYLLFSALMMAGLDGIQNKIHPGEAADKNLY DLPPEEDAKIPTVCAGLDQALEALDKDREFLTRGGVFTDSMLDAYLALKEQELAKFRMTTHPIEFEMYYSL
Sequences:
>Translated_471_residues MSKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGWKGIEASDMLLMPDPTAAFVD PFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKSTGIGDTAYFGPEPEFFIFDSVQWNTDMSGCFVKINSEEAP WSAGKEFEGGNTGHRPGTKGGYFPVAPVDTFQDMRSEMCLLLEQLGIPVEVHHHEVAGQGQNEIGTKFSTLVQRADWTQW SKYIIHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSELALFYIGGIIKHARALNAITNPTTN SYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIETRFPDPMANPYLLFSALMMAGLDGIQNKIHPGEAADKNLY DLPPEEDAKIPTVCAGLDQALEALDKDREFLTRGGVFTDSMLDAYLALKEQELAKFRMTTHPIEFEMYYSL >Mature_470_residues SKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGWKGIEASDMLLMPDPTAAFVDP FYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKSTGIGDTAYFGPEPEFFIFDSVQWNTDMSGCFVKINSEEAPW SAGKEFEGGNTGHRPGTKGGYFPVAPVDTFQDMRSEMCLLLEQLGIPVEVHHHEVAGQGQNEIGTKFSTLVQRADWTQWS KYIIHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSELALFYIGGIIKHARALNAITNPTTNS YKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIETRFPDPMANPYLLFSALMMAGLDGIQNKIHPGEAADKNLYD LPPEEDAKIPTVCAGLDQALEALDKDREFLTRGGVFTDSMLDAYLALKEQELAKFRMTTHPIEFEMYYSL
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=464, Percent_Identity=64.6551724137931, Blast_Score=666, Evalue=0.0, Organism=Escherichia coli, GI87081870, Length=400, Percent_Identity=25.75, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 52260; Mature: 52129
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP ; PS00182 GLNA_ADENYLATION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGW CCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCC KGIEASDMLLMPDPTAAFVDPFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKS CCCCCCCEEEECCCCHHHHCHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH TGIGDTAYFGPEPEFFIFDSVQWNTDMSGCFVKINSEEAPWSAGKEFEGGNTGHRPGTKG CCCCCCCCCCCCCCEEEEECEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC GYFPVAPVDTFQDMRSEMCLLLEQLGIPVEVHHHEVAGQGQNEIGTKFSTLVQRADWTQW CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCHHHHHHHHHHHHHHCHHHH SKYIIHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSELALFY HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHH IGGIIKHARALNAITNPTTNSYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIE HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCEEE TRFPDPMANPYLLFSALMMAGLDGIQNKIHPGEAADKNLYDLPPEEDAKIPTVCAGLDQA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LEALDKDREFLTRGGVFTDSMLDAYLALKEQELAKFRMTTHPIEFEMYYSL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC >Mature Secondary Structure SKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGW CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCC KGIEASDMLLMPDPTAAFVDPFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKS CCCCCCCEEEECCCCHHHHCHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH TGIGDTAYFGPEPEFFIFDSVQWNTDMSGCFVKINSEEAPWSAGKEFEGGNTGHRPGTKG CCCCCCCCCCCCCCEEEEECEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC GYFPVAPVDTFQDMRSEMCLLLEQLGIPVEVHHHEVAGQGQNEIGTKFSTLVQRADWTQW CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCHHHHHHHHHHHHHHCHHHH SKYIIHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSELALFY HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHH IGGIIKHARALNAITNPTTNSYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIE HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCEEE TRFPDPMANPYLLFSALMMAGLDGIQNKIHPGEAADKNLYDLPPEEDAKIPTVCAGLDQA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LEALDKDREFLTRGGVFTDSMLDAYLALKEQELAKFRMTTHPIEFEMYYSL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1969923 [H]