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The map label for this gene is ycfJ [C]

Identifier: 116690140

GI number: 116690140

Start: 2353344

End: 2354072

Strand: Direct

Name: ycfJ [C]

Synonym: Bcen2424_2119

Alternate gene names: 116690140

Gene position: 2353344-2354072 (Clockwise)

Preceding gene: 116690139

Following gene: 116690153

Centisome position: 67.55

GC content: 72.43

Gene sequence:

>729_bases
ATGGACAACCAGACTCAGACCACGCCGCAAAAGCAACGCCTCCACCCGCTGATCGCCACCGCAGCGGGCGCCGTCATCGT
CGCCAGCCTCGCGGCGACGGCAGCGATCACGGGCGTCTTCCCGAAAGCCACCAGCAGCAATGAACAGAATGGCCAGACCC
AGGCCGCGCTGATCGCGTCGCAGCCGGCCGTCGATACGGCCGCGGCCGCCAGCGCCGCGCTGGCCGCGCAAGCGCAGCGG
CAGGCCGCGGAACAGGCCGCCGCGCAGCAGAAGGCCGCCGTCGCGCAGGCCGAGCCGAAACCGGCGCCGCGCCCGGCCAC
GCCGCACCGCCGTCACACGACCGCGCCGCAGCCGCCGCAATACGCGCAGCAGCCGTCGGCGCCGGCGCAAGCCTACTGCC
AGAGCTGCGGCACGGTCGTCGCGATCACGCAGACGCGCACGCCGGGCCAGAGCTCGGGGATCGGCGCCGTGGGCGGCGCA
GCGGCCGGTGGTCTGCTCGGCAACCAGTTCGGCAACGGCAACGGCCGCACCGCGATGACGATCATCGGCGCGCTGGGCGG
CGGTCTCGCCGGCAACCAGGTCGAGAAGCAGGTCCGCGCTGAAACCGACTATCAGGTGCAAGTGCAGATGGAAAGCGGCG
CGACGCGCACGTTCACGTACCACAACCCGCCGCCGTTCGGCCAGGGTCAGCGCGTGCGGATCGAGAACGGCACGCTGGTC
GGCGCTTGA

Upstream 100 bases:

>100_bases
GGGACCAGAACGAGGCGCCGGAACGCCGAGTCTGCTCGCTCCCGAGCGTGGGATCCTGTCCGGCGCAGCGCGCCGATGCG
GATCGACCTTGGAGAAAAAA

Downstream 100 bases:

>100_bases
AGCCGATCGTGTAGTCGCCGGCGGCCTGCCCCGTGTGTCGTACGCGGCTCGCCCAAAACGAAAACGGCTCGCGAGCAAGC
GCTCACGAGCCGTTTTTCAT

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: Outer Membrane Lipoprotein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MDNQTQTTPQKQRLHPLIATAAGAVIVASLAATAAITGVFPKATSSNEQNGQTQAALIASQPAVDTAAAASAALAAQAQR
QAAEQAAAQQKAAVAQAEPKPAPRPATPHRRHTTAPQPPQYAQQPSAPAQAYCQSCGTVVAITQTRTPGQSSGIGAVGGA
AAGGLLGNQFGNGNGRTAMTIIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHNPPPFGQGQRVRIENGTLV
GA

Sequences:

>Translated_242_residues
MDNQTQTTPQKQRLHPLIATAAGAVIVASLAATAAITGVFPKATSSNEQNGQTQAALIASQPAVDTAAAASAALAAQAQR
QAAEQAAAQQKAAVAQAEPKPAPRPATPHRRHTTAPQPPQYAQQPSAPAQAYCQSCGTVVAITQTRTPGQSSGIGAVGGA
AAGGLLGNQFGNGNGRTAMTIIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHNPPPFGQGQRVRIENGTLV
GA
>Mature_242_residues
MDNQTQTTPQKQRLHPLIATAAGAVIVASLAATAAITGVFPKATSSNEQNGQTQAALIASQPAVDTAAAASAALAAQAQR
QAAEQAAAQQKAAVAQAEPKPAPRPATPHRRHTTAPQPPQYAQQPSAPAQAYCQSCGTVVAITQTRTPGQSSGIGAVGGA
AAGGLLGNQFGNGNGRTAMTIIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHNPPPFGQGQRVRIENGTLV
GA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24477; Mature: 24477

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQTQTTPQKQRLHPLIATAAGAVIVASLAATAAITGVFPKATSSNEQNGQTQAALIAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC
QPAVDTAAAASAALAAQAQRQAAEQAAAQQKAAVAQAEPKPAPRPATPHRRHTTAPQPPQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
YAQQPSAPAQAYCQSCGTVVAITQTRTPGQSSGIGAVGGAAAGGLLGNQFGNGNGRTAMT
HHCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCEE
IIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHNPPPFGQGQRVRIENGTLV
EEEHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCEEE
GA
CC
>Mature Secondary Structure
MDNQTQTTPQKQRLHPLIATAAGAVIVASLAATAAITGVFPKATSSNEQNGQTQAALIAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC
QPAVDTAAAASAALAAQAQRQAAEQAAAQQKAAVAQAEPKPAPRPATPHRRHTTAPQPPQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
YAQQPSAPAQAYCQSCGTVVAITQTRTPGQSSGIGAVGGAAAGGLLGNQFGNGNGRTAMT
HHCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCEE
IIGALGGGLAGNQVEKQVRAETDYQVQVQMESGATRTFTYHNPPPFGQGQRVRIENGTLV
EEEHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCEEE
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA