| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690131
Identifier: 116690131
GI number: 116690131
Start: 2340708
End: 2341553
Strand: Reverse
Name: 116690131
Synonym: Bcen2424_2110
Alternate gene names: NA
Gene position: 2341553-2340708 (Counterclockwise)
Preceding gene: 116690132
Following gene: 116690130
Centisome position: 67.21
GC content: 70.8
Gene sequence:
>846_bases TTGAAGGACATCCTCCACTTCTCGCATGCGAACGGCTTCCCGGCGTCGACGTACCGGACGATCTTCGCCGAACTGGCCGA CGACTACGAGTTGCGCTACGTCGAACGGATCGGCCACGACCGCCGCTACCCGGTGACGCGCGACTGGCCGCATCTCGTCG AGCAACTGCTCGACGACATCGGCAGCCGCTACGAGCGTCCGGTCTGGCTCGTCGGCCATTCGCTCGGCGGCTACCTGTCG CTGATGGCTGCGCTGAAGAAGCCGCAGTGGGTGCGCGGCGTCGTGATGATCGATTCGCCGATCATCGCGGGCTGGCGTGC CGGCGCGCTGCGCGCGAGCCAGTGGGCGGGGCTCGACGAGCGGCTGTCGCCGGCCGCGGCGACGCGCAACCGGCGCACGC GCTGGATGAGCCGCGACGAAGTCTGGCGGCACTTCCGCGAGAAGCCCGCGTTCGCGCGCTGGGACGAACGGATGCTGGCC GACTATATCGACTACGGGATTCCGCAGGCCGGCGCCGACGGCGAGCGCGCGCTCGCGTTCGACCGGCAGGTCGAATACCT GATCTACCGGACGCTGCCGCACACGCTCGGCCCGCGGCTCGCGCACGGCGCGCCGGTGCCGCTCGGTTTTCTCGCGGGCA CGCGCTCGCGCGAGGTGCGGCAAGTCGGGCTCGATGCGACGCGCCGCGCGACGCGGGGGCGCATCGAATGGCTCGAGGGC AGCCACCTGTTCCCGATGGAGCGGCCGATCGAGACCGCCCGCGCATTGCAGCGGATGCTGAATTCGCTGAAGGCGGAAGA GGGCGGCGTTTGGCAGGCCGGCGCGCCGCTCGCGAAGCGCGCCTGA
Upstream 100 bases:
>100_bases GGGAGTAAGTGCTGAAGCGCCAACTCCCACCGACCGCGAAGCATGGGGCGGGAGTAAGTGCTGAAGCACTCACTCCCGCC GACAAAGGAGACATCGGCGT
Downstream 100 bases:
>100_bases CGTTTCGCCGGGCGGCTGGAACGCCCGGCGGCACATGCGTGCGGCGCCGACCGGCCGGCCGGTTCACGCCGGGGCGCACG GTCGGCGCGGGTCGGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase/Acyltransferase; Hydrolase Alpha/Beta Fold Family; Hydrolases Or Acyltransferases; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Hydrolase Alpha/Beta Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Conserved Hydrolases Or Acyltransferase
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKDILHFSHANGFPASTYRTIFAELADDYELRYVERIGHDRRYPVTRDWPHLVEQLLDDIGSRYERPVWLVGHSLGGYLS LMAALKKPQWVRGVVMIDSPIIAGWRAGALRASQWAGLDERLSPAAATRNRRTRWMSRDEVWRHFREKPAFARWDERMLA DYIDYGIPQAGADGERALAFDRQVEYLIYRTLPHTLGPRLAHGAPVPLGFLAGTRSREVRQVGLDATRRATRGRIEWLEG SHLFPMERPIETARALQRMLNSLKAEEGGVWQAGAPLAKRA
Sequences:
>Translated_281_residues MKDILHFSHANGFPASTYRTIFAELADDYELRYVERIGHDRRYPVTRDWPHLVEQLLDDIGSRYERPVWLVGHSLGGYLS LMAALKKPQWVRGVVMIDSPIIAGWRAGALRASQWAGLDERLSPAAATRNRRTRWMSRDEVWRHFREKPAFARWDERMLA DYIDYGIPQAGADGERALAFDRQVEYLIYRTLPHTLGPRLAHGAPVPLGFLAGTRSREVRQVGLDATRRATRGRIEWLEG SHLFPMERPIETARALQRMLNSLKAEEGGVWQAGAPLAKRA >Mature_281_residues MKDILHFSHANGFPASTYRTIFAELADDYELRYVERIGHDRRYPVTRDWPHLVEQLLDDIGSRYERPVWLVGHSLGGYLS LMAALKKPQWVRGVVMIDSPIIAGWRAGALRASQWAGLDERLSPAAATRNRRTRWMSRDEVWRHFREKPAFARWDERMLA DYIDYGIPQAGADGERALAFDRQVEYLIYRTLPHTLGPRLAHGAPVPLGFLAGTRSREVRQVGLDATRRATRGRIEWLEG SHLFPMERPIETARALQRMLNSLKAEEGGVWQAGAPLAKRA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32163; Mature: 32163
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDILHFSHANGFPASTYRTIFAELADDYELRYVERIGHDRRYPVTRDWPHLVEQLLDDI CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GSRYERPVWLVGHSLGGYLSLMAALKKPQWVRGVVMIDSPIIAGWRAGALRASQWAGLDE HHHHCCCEEEECCCHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCCHHHHCCCHH RLSPAAATRNRRTRWMSRDEVWRHFREKPAFARWDERMLADYIDYGIPQAGADGERALAF HCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DRQVEYLIYRTLPHTLGPRLAHGAPVPLGFLAGTRSREVRQVGLDATRRATRGRIEWLEG HHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHCCCCCHHHHHHCCHHHHHHHCCCEEEECC SHLFPMERPIETARALQRMLNSLKAEEGGVWQAGAPLAKRA CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MKDILHFSHANGFPASTYRTIFAELADDYELRYVERIGHDRRYPVTRDWPHLVEQLLDDI CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GSRYERPVWLVGHSLGGYLSLMAALKKPQWVRGVVMIDSPIIAGWRAGALRASQWAGLDE HHHHCCCEEEECCCHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCCHHHHCCCHH RLSPAAATRNRRTRWMSRDEVWRHFREKPAFARWDERMLADYIDYGIPQAGADGERALAF HCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DRQVEYLIYRTLPHTLGPRLAHGAPVPLGFLAGTRSREVRQVGLDATRRATRGRIEWLEG HHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHCCCCCHHHHHHCCHHHHHHHCCCEEEECC SHLFPMERPIETARALQRMLNSLKAEEGGVWQAGAPLAKRA CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA