| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pyrG [H]
Identifier: 116690130
GI number: 116690130
Start: 2338858
End: 2340516
Strand: Reverse
Name: pyrG [H]
Synonym: Bcen2424_2109
Alternate gene names: 116690130
Gene position: 2340516-2338858 (Counterclockwise)
Preceding gene: 116690131
Following gene: 116690129
Centisome position: 67.18
GC content: 63.23
Gene sequence:
>1659_bases ATGACCAAATATGTTTTCGTCACCGGCGGCGTAGTTTCTTCCCTTGGCAAGGGCATTGCCGCCGCTTCCCTCGCCGCGAT CCTCGAATCGCGCGGTCTGAAAGTCACCCTCCTCAAGCTTGATCCCTACATCAACGTCGACCCCGGCACGATGAGCCCGT TTCAACACGGCGAAGTGTTCGTGACGGAAGACGGAGCGGAGACCGACCTCGACCTCGGCCACTACGAGCGCTTCATCAGC ACGAAGATGCGCAAGGCCAACAACTTCACGACCGGCCAGATCTACGAATCGGTGATCCGCAAGGAACGCCGCGGCGACTA TCTCGGCAAGACCGTGCAGGTCATTCCGCACATCACGAACGAAATCCAGGCGTTCATCGAGCGCGGGGCCGCATCGGCCA CCTGCGGCGAGCCGGACGTCGCGATCGTCGAGATCGGCGGCACGGTCGGCGACATCGAGTCGCTGCCGTTCCTCGAGGCC GCACGCCAGATGAGCCTGCGCCTCGGCCGCAACAGCGCGTGCTTCGTGCACCTGACGCTCGTGCCGTACGTCGCGACGGC CGGCGAGCTGAAGACGAAGCCGACCCAGCACAGCGTGCAGAAGCTGCGCGAGATCGGCATCCTGCCGCACGTGCTGCTGT GCCGTGCGGATCGCCGCATCCCCGACGACGAATCGAAGAAGATCTCGATGTTCTCGAACGTGCCGGAAGACGCCGTGATC TCGGTGTGGGATGCCGACAGCATCTACAAGATTCCGCAGATGCTGCACGACCAGGGCCTCGACCGGATCATCTGCGAAGA GCTGAAGCTGTCGCCCAAGGACGCCGACCTGAGCATGTGGTCGGCGCTCGTCGAGAAGCTCGAGAACCCGAAGCAGGAAG TGACGATCGGCATGGTCGGCAAGTACGTCGACCTGACCGAGTCGTACAAGTCGCTGATCGAGGCGCTGCGCCATGCGTCG ATCCACACGTCGACCAAGGTCAACATCGAGTACATCGACTCGGAAGAGCTCGAGACCAACGGTGTCGACAGCCTGAAGCA TCTCGACGCCGTGCTGGTGCCGGGCGGTTTCGGCCGTCGCGGCACGGAAGGCAAGATCGCCGCGGTTCGCTACGCGCGCG AGTCGAAGGTGCCGTACCTCGGCATCTGCCTCGGCATGCAGCTCGCGGTGATCGAATTCGCGCGCGACGTCGTCGGCCTG AAGCAGGCGAACAGCACGGAATTCGATCCGGACACGCCGGAGCGTGTGGTCGCGCTGATCACCGAATGGTACGACCGCGA AGGCAAGGTCGAGACGCGCACCGAGGAATCCGACCTCGGCGGCACGATGCGCCTGGGTTCGCAACGCTGCCCGATCAAGC CGGGCACGATGGCGGAAGAAATCTACGGCAAGGACGTGAACGAGCGCCATCGCCACCGTTATGAAGTCAATAACCGCTTC GTGCCCCAGCTCGAAGCCGGCGGCCTTATCATCAGCGCCCGTACCCCGAGCGAGGATCTGCCGGAAATGATGGAACTGCC GCGTTCGATGCACCCGTGGTTCGTCGGCGTCCAGTTCCACCCGGAATTCACGTCCACGCCGCGTGACGGTCATCCTCTGT TCAGGTCGTTCGTCGAAGCGGCGCTTGCCAACAAGCAAGCGCGCGGAGTGCAAGCATGA
Upstream 100 bases:
>100_bases TCGGCACGGATTGGCCCGAACGGGGCGCGATCATCACGCCAATTGCTGAGAGAAGGGCGGGCTTTACGGTATAATCCGTT TTTCCCGCGAGCATCCAGCG
Downstream 100 bases:
>100_bases AGCTGTGCGATTTCGAGGTCGGTCTCGACCAGCCTTTCTTCCTGATCGCGGGTACCTGCGTCGTCGAATCGGAGCAAATG ACGATCGACACGGCGGGCCG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIS TKMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITNEIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEA ARQMSLRLGRNSACFVHLTLVPYVATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISMFSNVPEDAVI SVWDADSIYKIPQMLHDQGLDRIICEELKLSPKDADLSMWSALVEKLENPKQEVTIGMVGKYVDLTESYKSLIEALRHAS IHTSTKVNIEYIDSEELETNGVDSLKHLDAVLVPGGFGRRGTEGKIAAVRYARESKVPYLGICLGMQLAVIEFARDVVGL KQANSTEFDPDTPERVVALITEWYDREGKVETRTEESDLGGTMRLGSQRCPIKPGTMAEEIYGKDVNERHRHRYEVNNRF VPQLEAGGLIISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFRSFVEAALANKQARGVQA
Sequences:
>Translated_552_residues MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIS TKMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITNEIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEA ARQMSLRLGRNSACFVHLTLVPYVATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISMFSNVPEDAVI SVWDADSIYKIPQMLHDQGLDRIICEELKLSPKDADLSMWSALVEKLENPKQEVTIGMVGKYVDLTESYKSLIEALRHAS IHTSTKVNIEYIDSEELETNGVDSLKHLDAVLVPGGFGRRGTEGKIAAVRYARESKVPYLGICLGMQLAVIEFARDVVGL KQANSTEFDPDTPERVVALITEWYDREGKVETRTEESDLGGTMRLGSQRCPIKPGTMAEEIYGKDVNERHRHRYEVNNRF VPQLEAGGLIISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFRSFVEAALANKQARGVQA >Mature_551_residues TKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIST KMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITNEIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEAA RQMSLRLGRNSACFVHLTLVPYVATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISMFSNVPEDAVIS VWDADSIYKIPQMLHDQGLDRIICEELKLSPKDADLSMWSALVEKLENPKQEVTIGMVGKYVDLTESYKSLIEALRHASI HTSTKVNIEYIDSEELETNGVDSLKHLDAVLVPGGFGRRGTEGKIAAVRYARESKVPYLGICLGMQLAVIEFARDVVGLK QANSTEFDPDTPERVVALITEWYDREGKVETRTEESDLGGTMRLGSQRCPIKPGTMAEEIYGKDVNERHRHRYEVNNRFV PQLEAGGLIISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFRSFVEAALANKQARGVQA
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI28559085, Length=565, Percent_Identity=44.9557522123894, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI28559083, Length=565, Percent_Identity=44.9557522123894, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI221316689, Length=565, Percent_Identity=44.9557522123894, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI148491070, Length=562, Percent_Identity=45.1957295373665, Blast_Score=477, Evalue=1e-134, Organism=Escherichia coli, GI1789142, Length=550, Percent_Identity=62.3636363636364, Blast_Score=688, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=40.8866995073892, Blast_Score=437, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6319432, Length=570, Percent_Identity=42.280701754386, Blast_Score=459, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6322563, Length=574, Percent_Identity=42.6829268292683, Blast_Score=451, Evalue=1e-128, Organism=Drosophila melanogaster, GI24664469, Length=560, Percent_Identity=45.1785714285714, Blast_Score=478, Evalue=1e-135, Organism=Drosophila melanogaster, GI21357815, Length=505, Percent_Identity=43.7623762376238, Blast_Score=404, Evalue=1e-112,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 61236; Mature: 61104
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFISTKMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH EIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEAARQMSLRLGRNSACFVHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE VPYVATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISMFSNVPEDAVI HHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEE SVWDADSIYKIPQMLHDQGLDRIICEELKLSPKDADLSMWSALVEKLENPKQEVTIGMVG EEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHEEHHHHH KYVDLTESYKSLIEALRHASIHTSTKVNIEYIDSEELETNGVDSLKHLDAVLVPGGFGRR HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCEEEECCCCCCC GTEGKIAAVRYARESKVPYLGICLGMQLAVIEFARDVVGLKQANSTEFDPDTPERVVALI CCCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH TEWYDREGKVETRTEESDLGGTMRLGSQRCPIKPGTMAEEIYGKDVNERHRHRYEVNNRF HHHHCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCC VPQLEAGGLIISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFRSFVEA CCEECCCCEEEECCCCCCCHHHHHHCCHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALANKQARGVQA HHHCCCCCCCCC >Mature Secondary Structure TKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFISTKMRKANNFTTGQIYESVIRKERRGDYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH EIQAFIERGAASATCGEPDVAIVEIGGTVGDIESLPFLEAARQMSLRLGRNSACFVHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE VPYVATAGELKTKPTQHSVQKLREIGILPHVLLCRADRRIPDDESKKISMFSNVPEDAVI HHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEE SVWDADSIYKIPQMLHDQGLDRIICEELKLSPKDADLSMWSALVEKLENPKQEVTIGMVG EEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHEEHHHHH KYVDLTESYKSLIEALRHASIHTSTKVNIEYIDSEELETNGVDSLKHLDAVLVPGGFGRR HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCEEEECCCCCCC GTEGKIAAVRYARESKVPYLGICLGMQLAVIEFARDVVGLKQANSTEFDPDTPERVVALI CCCCCEEEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH TEWYDREGKVETRTEESDLGGTMRLGSQRCPIKPGTMAEEIYGKDVNERHRHRYEVNNRF HHHHCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCC VPQLEAGGLIISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFRSFVEA CCEECCCCEEEECCCCCCCHHHHHHCCHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALANKQARGVQA HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA