| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690088
Identifier: 116690088
GI number: 116690088
Start: 2294939
End: 2295238
Strand: Direct
Name: 116690088
Synonym: Bcen2424_2067
Alternate gene names: NA
Gene position: 2294939-2295238 (Clockwise)
Preceding gene: 116690078
Following gene: 116690100
Centisome position: 65.87
GC content: 70.0
Gene sequence:
>300_bases ATGAAACTGTCGACCACCGTCGCCTGCATGCTGCTCGCATGCGCCAGCACCGCCGCGTTCGCGGGGCCGCACCTCACGCC GCAGGAATGCCACGCGTACCCGTTCGTGCACACGGGCAGTGGCGTCTCGCGTGCGGACCTCGTACGCGAGCTGTCCGAGC TCGAACAGGTCGGCTACGATCCGGCCCACGCGAGCCCGTACTATCCCGACGATCTCGACGGCGCGAAGCATCGGCTCGCC GCCGAGTACCGCGCCGACTGCACGCATGCGCTGACGGCCGACGCCGGCACGCGGCACTGA
Upstream 100 bases:
>100_bases GTACGTGAAACATGTTTCATCCGTGCGTCGCCCGCCCCGCGACGGCTGCCGCCTACGCTGACGTCATGCGGCATCGGGCC GCGAAACCAGGAGCTACCGG
Downstream 100 bases:
>100_bases CCACACTGCCCGGCGCAACACACCAGCCGGAAAAAATAAAAGGCGGCACGCATGTGCCGCCTTTTCTTCATGAACGCGCA AGGATGCGAACCCGATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MKLSTTVACMLLACASTAAFAGPHLTPQECHAYPFVHTGSGVSRADLVRELSELEQVGYDPAHASPYYPDDLDGAKHRLA AEYRADCTHALTADAGTRH
Sequences:
>Translated_99_residues MKLSTTVACMLLACASTAAFAGPHLTPQECHAYPFVHTGSGVSRADLVRELSELEQVGYDPAHASPYYPDDLDGAKHRLA AEYRADCTHALTADAGTRH >Mature_99_residues MKLSTTVACMLLACASTAAFAGPHLTPQECHAYPFVHTGSGVSRADLVRELSELEQVGYDPAHASPYYPDDLDGAKHRLA AEYRADCTHALTADAGTRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10600; Mature: 10600
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSTTVACMLLACASTAAFAGPHLTPQECHAYPFVHTGSGVSRADLVRELSELEQVGYD CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCC PAHASPYYPDDLDGAKHRLAAEYRADCTHALTADAGTRH CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCC >Mature Secondary Structure MKLSTTVACMLLACASTAAFAGPHLTPQECHAYPFVHTGSGVSRADLVRELSELEQVGYD CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCC PAHASPYYPDDLDGAKHRLAAEYRADCTHALTADAGTRH CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA