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The map label for this gene is ylbK [H]

Identifier: 116690078

GI number: 116690078

Start: 2283611

End: 2284528

Strand: Direct

Name: ylbK [H]

Synonym: Bcen2424_2057

Alternate gene names: 116690078

Gene position: 2283611-2284528 (Clockwise)

Preceding gene: 116690075

Following gene: 116690088

Centisome position: 65.55

GC content: 68.41

Gene sequence:

>918_bases
ATGTCGTCCCCTCGCCTGTCGCGCCGCCACTTCACGATCGCGTGCGCGTCCGCCAGCCTCGCCGCCTGTACGTCCTTCGG
CGACAAGTCCCGCCCCGGCACGGCACTCCCGCAGGAGAAGCCCGTCAAGATCGGCATCGCGCTCGGCGGCGGCGCCGCGC
GCGGGTTCTCGCACATCGGCGTGCTGAAGGCGCTCGAGGCGCGCGGCATTCCGATCGAGATCGTCGCCGGGACGAGCGCG
GGCTCGGTGGTCGGCGCGCTCTACGCGTCGGGCATGAACGCGCTGCAGATCAACAAGATCGCCCTCGACATGGACCAGGC
ATCGATCAGCGACTGGGCGCTGCCGTTTCGCTCGCGCGGCCTGCTGCAAGGCGTCGCGCTGCAGAATTTCCTGAACAAGA
CGCTCAACAACCGGCCGATCGAGAAGATGGCGAAGCCGCTCGGCATCGTCGCGACGGACCTGCAAAGCGGCCAGCCGATC
CTGTTCCAGCAAGGCAACACGGGGCTCGCGGTGCGCGCGTCGTGCAGCGTGCCGTCGGTGTTCGAGCCGGTGAAGATCGG
CAATCGCGAATATGTGGACGGCGGCCTGGTGAGCCCGGTGCCGGCGTCGTTCGCGCGCAAGATGGGCGCGAGCTTCGTGA
TCGCGGTCGACATCTCCGCCCGGCCGGACGGCGCGGCGACCAACAACCCGATCGAGATGCTGCTGCAGACCTTCACGATC
ATGGGCCAGACGATCAAGACCTACGAGCTCGACAAATATGCGGACGTCGTGATTCGCCCGAACCTGGCGGCGATGGGCGG
CAGCGACTTCAACCAGCGCAACGCGGCGATCCTCGCGGGCGAGGAAGCGGTCGCGCGCATCATGCCGGAACTGCAGCGCA
AGCTCGCGGCGGCGCGGGGCGTGACTGCCGCCGCGTAA

Upstream 100 bases:

>100_bases
GGCGCGGCGCCGGCCGCACGCAACCCGCTGCGCGGCCGCTCGGAACCTATCGCCGCCGCGGGCCGTGTAACCCGCCGCCA
AGCCGCCGGAGAACCATTCG

Downstream 100 bases:

>100_bases
GCCGCGATGGGCGGGAGGCCGCGGCACGCGCCGCCTCCCGGTGGCCGACGGAACGACTTACGCCTCGCCGTCGGCGCCAG
CCTCAAAACAAAAAACCCTG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSSPRLSRRHFTIACASASLAACTSFGDKSRPGTALPQEKPVKIGIALGGGAARGFSHIGVLKALEARGIPIEIVAGTSA
GSVVGALYASGMNALQINKIALDMDQASISDWALPFRSRGLLQGVALQNFLNKTLNNRPIEKMAKPLGIVATDLQSGQPI
LFQQGNTGLAVRASCSVPSVFEPVKIGNREYVDGGLVSPVPASFARKMGASFVIAVDISARPDGAATNNPIEMLLQTFTI
MGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARGVTAAA

Sequences:

>Translated_305_residues
MSSPRLSRRHFTIACASASLAACTSFGDKSRPGTALPQEKPVKIGIALGGGAARGFSHIGVLKALEARGIPIEIVAGTSA
GSVVGALYASGMNALQINKIALDMDQASISDWALPFRSRGLLQGVALQNFLNKTLNNRPIEKMAKPLGIVATDLQSGQPI
LFQQGNTGLAVRASCSVPSVFEPVKIGNREYVDGGLVSPVPASFARKMGASFVIAVDISARPDGAATNNPIEMLLQTFTI
MGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARGVTAAA
>Mature_304_residues
SSPRLSRRHFTIACASASLAACTSFGDKSRPGTALPQEKPVKIGIALGGGAARGFSHIGVLKALEARGIPIEIVAGTSAG
SVVGALYASGMNALQINKIALDMDQASISDWALPFRSRGLLQGVALQNFLNKTLNNRPIEKMAKPLGIVATDLQSGQPIL
FQQGNTGLAVRASCSVPSVFEPVKIGNREYVDGGLVSPVPASFARKMGASFVIAVDISARPDGAATNNPIEMLLQTFTIM
GQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARGVTAAA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=233, Percent_Identity=33.0472103004292, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI260656041, Length=233, Percent_Identity=33.0472103004292, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI116256487, Length=233, Percent_Identity=33.0472103004292, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI260656043, Length=233, Percent_Identity=33.0472103004292, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI260656037, Length=233, Percent_Identity=33.0472103004292, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI148727335, Length=194, Percent_Identity=34.020618556701, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI148727290, Length=194, Percent_Identity=34.020618556701, Blast_Score=98, Evalue=7e-21,
Organism=Escherichia coli, GI226510936, Length=298, Percent_Identity=34.5637583892617, Blast_Score=142, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71997289, Length=164, Percent_Identity=29.2682926829268, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71997299, Length=164, Percent_Identity=29.2682926829268, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=186, Percent_Identity=30.1075268817204, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281376913, Length=196, Percent_Identity=30.6122448979592, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571388, Length=193, Percent_Identity=30.5699481865285, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31902; Mature: 31771

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPRLSRRHFTIACASASLAACTSFGDKSRPGTALPQEKPVKIGIALGGGAARGFSHIG
CCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH
VLKALEARGIPIEIVAGTSAGSVVGALYASGMNALQINKIALDMDQASISDWALPFRSRG
HHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHCCCHHHCH
LLQGVALQNFLNKTLNNRPIEKMAKPLGIVATDLQSGQPILFQQGNTGLAVRASCSVPSV
HHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCCC
FEPVKIGNREYVDGGLVSPVPASFARKMGASFVIAVDISARPDGAATNNPIEMLLQTFTI
CCHHHCCCEEECCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
MGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARG
HCCHHEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC
VTAAA
CCCCC
>Mature Secondary Structure 
SSPRLSRRHFTIACASASLAACTSFGDKSRPGTALPQEKPVKIGIALGGGAARGFSHIG
CCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH
VLKALEARGIPIEIVAGTSAGSVVGALYASGMNALQINKIALDMDQASISDWALPFRSRG
HHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHCCCHHHCH
LLQGVALQNFLNKTLNNRPIEKMAKPLGIVATDLQSGQPILFQQGNTGLAVRASCSVPSV
HHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCCC
FEPVKIGNREYVDGGLVSPVPASFARKMGASFVIAVDISARPDGAATNNPIEMLLQTFTI
CCHHHCCCEEECCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
MGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARG
HCCHHEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC
VTAAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]