Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689908

Identifier: 116689908

GI number: 116689908

Start: 2092213

End: 2093388

Strand: Reverse

Name: 116689908

Synonym: Bcen2424_1887

Alternate gene names: NA

Gene position: 2093388-2092213 (Counterclockwise)

Preceding gene: 116689909

Following gene: 116689907

Centisome position: 60.09

GC content: 71.77

Gene sequence:

>1176_bases
ATGACCGCGCTGAAGACGCTCGCCATCGCCAATTACCGCTCGCTGCGCGAGCTGATCGTGCCGCTCGCGGCGCTCAATGT
CGTGACGGGGCCGAACGGCAGCGGCAAATCGAGCGTGTATCGCGCGCTGCGGCTGCTCGCCGACACCGCGCAGGGCCGCG
TGATCCCGTCGCTCGCACGCGAGGGCGGCTTGCCGTCGACGTTGTGGGCCGGCCCCGAGCGCTTCTCGCGCGCGATGCTG
GCGGGCGACGTGCCGGTGACGGGCACCGTGCGCAAGGGGCCGGTGAGCCTGAAGCTCGGCTTCGCGTGCGACGATTTCGG
CTATGCGATCGATCTCGGCCTGCCGCTGCCGAGCCGCTCACAGTTCGCGCTCGATCCGGTGGTCAAGCGCGAATGCATCT
GGGGCGGCGCGTTGCTGCGTCCGTCGACGCTGCTGGTCGACCGGCAGGGCGCGCAGATCCGTGCGCGTACCGCATCGGGC
GACTGGCAGACGATTCCGCAGCCGGTCGCGAGCTTCGACAGCATGATGACCGAGTTCGCCGATCCGACCGGGGCGCCCGA
GATGATCGCGGTGCGCGAACGGATTCGCTCGTGGCGCTTCTACGACCATTTCCGGACCGATGCGCAGGCGCCGGCACGCC
AGTCGCACATCGGCACCCATACGCCGGTGCTCGCGGACGACGGGGCCGACCTGGCCGCCGCGCTGCAGACGATCCGCGAA
ATCGGCGACGCGGCGGCGCTCGATGCGGCGATCGACGACGCGTTTCCCGGCGCGTCGGTCGAGATCGACAATCCGGGCGG
CCGCGGCCGCTTCGACGTGCTGATGCGCCAGCCGGGGCTGCTGCGGCCGCTGGCGGCGGCCGAGCTGTCGGACGGCACGC
TGCGCTACCTGCTGCTCGCGGCCGCGCTGCTGACGCCGCGGCCGCCGGCGCTGATGGTGCTGAACGAACCGGAGACGAGC
CTGCATCCCGATCTGCTGCCGGCGCTCGGCCGCCTGATCGCGCAGGCCGCCCGGCGTTCGCAGGTGCTGGTCGTGTCGCA
CGCGGCGCGGCTCATCGCGACGCTCGAGCGCGAGGCCGACTGCGAATCGCTGGTGCTCGACAAGCAGCTCGGCGCGACCG
CGCTCGTCGATGCCGATTCGCGCGACCTGCCGCCCTGGAAGTGGCCATCGCGTTGA

Upstream 100 bases:

>100_bases
CGCCGCCAGCACGGCGGCCAACACCGCAGCCGACCCGCAGGCCGTCGACGGCCGCTGAACGCGGCCCGAGTCCTGCGGCC
ATTCCCTGTTTCCCATTGTC

Downstream 100 bases:

>100_bases
CCGCCTGATTGCGTGCTCGAGGCCGTGAGCGGCGCCAGGAGGCGCCGAATGGGGCCGGCCGGGCGCGAAACGAGGCGTCC
GCGCTCGATCGGCCGAATGT

Product: ATPase-like protein

Products: NA

Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; ATPase RecF-Like Protein; RecF/RecN/SMC N Terminal Domain; RecF/RecN/SMC Domain-Containing Protein; Recf Like Family Protein; ATPase RecF-Like; DNA Replication And Repair Protein RecF; SMC Domain Protein

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTALKTLAIANYRSLRELIVPLAALNVVTGPNGSGKSSVYRALRLLADTAQGRVIPSLAREGGLPSTLWAGPERFSRAML
AGDVPVTGTVRKGPVSLKLGFACDDFGYAIDLGLPLPSRSQFALDPVVKRECIWGGALLRPSTLLVDRQGAQIRARTASG
DWQTIPQPVASFDSMMTEFADPTGAPEMIAVRERIRSWRFYDHFRTDAQAPARQSHIGTHTPVLADDGADLAAALQTIRE
IGDAAALDAAIDDAFPGASVEIDNPGGRGRFDVLMRQPGLLRPLAAAELSDGTLRYLLLAAALLTPRPPALMVLNEPETS
LHPDLLPALGRLIAQAARRSQVLVVSHAARLIATLEREADCESLVLDKQLGATALVDADSRDLPPWKWPSR

Sequences:

>Translated_391_residues
MTALKTLAIANYRSLRELIVPLAALNVVTGPNGSGKSSVYRALRLLADTAQGRVIPSLAREGGLPSTLWAGPERFSRAML
AGDVPVTGTVRKGPVSLKLGFACDDFGYAIDLGLPLPSRSQFALDPVVKRECIWGGALLRPSTLLVDRQGAQIRARTASG
DWQTIPQPVASFDSMMTEFADPTGAPEMIAVRERIRSWRFYDHFRTDAQAPARQSHIGTHTPVLADDGADLAAALQTIRE
IGDAAALDAAIDDAFPGASVEIDNPGGRGRFDVLMRQPGLLRPLAAAELSDGTLRYLLLAAALLTPRPPALMVLNEPETS
LHPDLLPALGRLIAQAARRSQVLVVSHAARLIATLEREADCESLVLDKQLGATALVDADSRDLPPWKWPSR
>Mature_390_residues
TALKTLAIANYRSLRELIVPLAALNVVTGPNGSGKSSVYRALRLLADTAQGRVIPSLAREGGLPSTLWAGPERFSRAMLA
GDVPVTGTVRKGPVSLKLGFACDDFGYAIDLGLPLPSRSQFALDPVVKRECIWGGALLRPSTLLVDRQGAQIRARTASGD
WQTIPQPVASFDSMMTEFADPTGAPEMIAVRERIRSWRFYDHFRTDAQAPARQSHIGTHTPVLADDGADLAAALQTIREI
GDAAALDAAIDDAFPGASVEIDNPGGRGRFDVLMRQPGLLRPLAAAELSDGTLRYLLLAAALLTPRPPALMVLNEPETSL
HPDLLPALGRLIAQAARRSQVLVVSHAARLIATLEREADCESLVLDKQLGATALVDADSRDLPPWKWPSR

Specific function: Unknown

COG id: COG4637

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41946; Mature: 41814

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALKTLAIANYRSLRELIVPLAALNVVTGPNGSGKSSVYRALRLLADTAQGRVIPSLAR
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
EGGLPSTLWAGPERFSRAMLAGDVPVTGTVRKGPVSLKLGFACDDFGYAIDLGLPLPSRS
CCCCCCHHHCCHHHHHHHHHCCCCCCCCCEECCCEEEEEEEEECCCCEEEEECCCCCCCC
QFALDPVVKRECIWGGALLRPSTLLVDRQGAQIRARTASGDWQTIPQPVASFDSMMTEFA
CCHHCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC
DPTGAPEMIAVRERIRSWRFYDHFRTDAQAPARQSHIGTHTPVLADDGADLAAALQTIRE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEECCCCHHHHHHHHHHH
IGDAAALDAAIDDAFPGASVEIDNPGGRGRFDVLMRQPGLLRPLAAAELSDGTLRYLLLA
HCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHEECCCCCCCCHHHHHCCCCHHHHHHHH
AALLTPRPPALMVLNEPETSLHPDLLPALGRLIAQAARRSQVLVVSHAARLIATLEREAD
HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCC
CESLVLDKQLGATALVDADSRDLPPWKWPSR
HHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TALKTLAIANYRSLRELIVPLAALNVVTGPNGSGKSSVYRALRLLADTAQGRVIPSLAR
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
EGGLPSTLWAGPERFSRAMLAGDVPVTGTVRKGPVSLKLGFACDDFGYAIDLGLPLPSRS
CCCCCCHHHCCHHHHHHHHHCCCCCCCCCEECCCEEEEEEEEECCCCEEEEECCCCCCCC
QFALDPVVKRECIWGGALLRPSTLLVDRQGAQIRARTASGDWQTIPQPVASFDSMMTEFA
CCHHCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC
DPTGAPEMIAVRERIRSWRFYDHFRTDAQAPARQSHIGTHTPVLADDGADLAAALQTIRE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEECCCCHHHHHHHHHHH
IGDAAALDAAIDDAFPGASVEIDNPGGRGRFDVLMRQPGLLRPLAAAELSDGTLRYLLLA
HCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHEECCCCCCCCHHHHHCCCCHHHHHHHH
AALLTPRPPALMVLNEPETSLHPDLLPALGRLIAQAARRSQVLVVSHAARLIATLEREAD
HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCC
CESLVLDKQLGATALVDADSRDLPPWKWPSR
HHHHHHHHHCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA