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The map label for this gene is araJ [C]

Identifier: 116689311

GI number: 116689311

Start: 1417200

End: 1418417

Strand: Direct

Name: araJ [C]

Synonym: Bcen2424_1289

Alternate gene names: 116689311

Gene position: 1417200-1418417 (Clockwise)

Preceding gene: 116689310

Following gene: 116689312

Centisome position: 40.68

GC content: 70.11

Gene sequence:

>1218_bases
ATGTCGTCGGTGCAGGTGAGGGTGCTCGCGCTGTTTTCGGTCGGGTATTTCGTGTCGTACGTCTTTCGCGGCGTCAATCT
GGGCTTCGCGCCGTTCGTCACGCATGAGCTCGGGCTGTCGGCCGCCGATCTCGGCCTGCTCACCAGCCTCTATTTCCTCG
GCTTCGCGGGCGCGCAGATCCCGGCCGGCGTGATGCTCGACCACTTCGGCCCGCGCCGCGTGACGGCCGGCATGCTGCTG
TTCGCGGCGGCCGGCGCGGCCGTGTTCGGTGCGGCGCATGGCATCGGCACGATGATGGTCGGCCGGCTGCTGATCGGCGT
CGGCGTATCGGTCTGTCTCGGTGCGGCGTTCAAGGCGCTCGCGCAGCATTTCCCGGTTGGCCGGCTGCCGCTCGTCAACG
GTCTCGTGATGGCCGTGGGCGGCCTCGGCGGCGTAATGGTTGGCTCGCCGCTGACCTGGCTGCTCGGCTGGGCGAGCTGG
CGCGCGATCTGTTTCGGCCTCGCGGTGCTGACCGTGGCCGTCGCTGTGTCGATCGGCTTCGGGGCGCCCGACGCGCAGCA
GGCGCGTCACCAGGGCGGCCTCGTCAGCCAGTTCAAGGGCACGTGGCACATCCTGACGAGCCGCGCGTTCTGGAAGATCG
CATCGTTCTCCGTCGTCACGCAGGGCGTGTTCTATGCGATGCAGTCGCTGTGGGTTGGCCCGTATCTGCGCGACGTCGGC
GGATTCGACGCGCCGCATGCCGCGCGCCTCGTGTCGGTGCTCGGCTTCGCGATGATGGCCGGCTGCGTCGGCTTCGGCGC
GGCGGCACGCGTGCTCGAGCGGCGCGGCGTGTCGGTCTACGCGACTTGCGGCATCGGCATGGCGCTGTTCGTCGCGACGC
AGCTCGCGATCGTCGCGCGCGTGCCGTTGCCGCCCGCCGTGCTGTGGGCCGCCTACGGGATGTTCGGCGGCGTGGGCATC
CTGACCTACGCGGTGATGGCCGGCCACTTTCCCGCCCATCTGATCGGGCGCGCGAACACGACGCTCACGCTCGTGATCTT
CCTGCTGATCTTCGCGTTCCAGATCGGCGTCGGCGCCGTACTGTCGCACTGGCCGACGGTCGACGGCCGTTATTCGGCCG
CCGCGCACTTCACCGCCTGGGGCGTGCTGCTCGCGCTGCAGCTCGCGAGCGCGGTCTGGTACGTCTGGCCCGCGCGCGGC
GCTGGCCAAGCGCACTGA

Upstream 100 bases:

>100_bases
TATCATCCGACGAATTCGACGAAACGCCGTCACCGAGGTGACGGCGTTTTCTTTTGTGCGCGGCGCGGCGTCACGCGTCT
TCACATGACAAGGAGAAGCG

Downstream 100 bases:

>100_bases
TCCGGCGGTACGCTGATGCATGGGGCGGCCGCGAAAACAGGGCCGCAGCACGGTGCGCTGCGCCCGCCGCTCGCGGCGCG
CGCATGATCGGACGGCCATA

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Transporter MFS Superfamily; Facilitator Family Oxalate/Formate Antiporter; Carbohydrate Transport Membrane Protein; MFS Family Transporter; Facilitator Family Transporter; Sugar Phosphate Permease; Facilitator Superfamily Permease

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQIPAGVMLDHFGPRRVTAGMLL
FAAAGAAVFGAAHGIGTMMVGRLLIGVGVSVCLGAAFKALAQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWASW
RAICFGLAVLTVAVAVSIGFGAPDAQQARHQGGLVSQFKGTWHILTSRAFWKIASFSVVTQGVFYAMQSLWVGPYLRDVG
GFDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYATCGIGMALFVATQLAIVARVPLPPAVLWAAYGMFGGVGI
LTYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAVLSHWPTVDGRYSAAAHFTAWGVLLALQLASAVWYVWPARG
AGQAH

Sequences:

>Translated_405_residues
MSSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQIPAGVMLDHFGPRRVTAGMLL
FAAAGAAVFGAAHGIGTMMVGRLLIGVGVSVCLGAAFKALAQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWASW
RAICFGLAVLTVAVAVSIGFGAPDAQQARHQGGLVSQFKGTWHILTSRAFWKIASFSVVTQGVFYAMQSLWVGPYLRDVG
GFDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYATCGIGMALFVATQLAIVARVPLPPAVLWAAYGMFGGVGI
LTYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAVLSHWPTVDGRYSAAAHFTAWGVLLALQLASAVWYVWPARG
AGQAH
>Mature_404_residues
SSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQIPAGVMLDHFGPRRVTAGMLLF
AAAGAAVFGAAHGIGTMMVGRLLIGVGVSVCLGAAFKALAQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWASWR
AICFGLAVLTVAVAVSIGFGAPDAQQARHQGGLVSQFKGTWHILTSRAFWKIASFSVVTQGVFYAMQSLWVGPYLRDVGG
FDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYATCGIGMALFVATQLAIVARVPLPPAVLWAAYGMFGGVGIL
TYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAVLSHWPTVDGRYSAAAHFTAWGVLLALQLASAVWYVWPARGA
GQAH

Specific function: May Be Involved In Either The Transport Or Processing Of Arabinose Polymers. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42241; Mature: 42110

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
>Mature Secondary Structure 
SSVQVRVLALFSVGYFVSYVFRGVNLGFAPFVTHELGLSAADLGLLTSLYFLGFAGAQI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PAGVMLDHFGPRRVTAGMLLFAAAGAAVFGAAHGIGTMMVGRLLIGVGVSVCLGAAFKAL
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQHFPVGRLPLVNGLVMAVGGLGGVMVGSPLTWLLGWASWRAICFGLAVLTVAVAVSIGF
HHHCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GAPDAQQARHQGGLVSQFKGTWHILTSRAFWKIASFSVVTQGVFYAMQSLWVGPYLRDVG
CCCCHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
GFDAPHAARLVSVLGFAMMAGCVGFGAAARVLERRGVSVYATCGIGMALFVATQLAIVAR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHC
VPLPPAVLWAAYGMFGGVGILTYAVMAGHFPAHLIGRANTTLTLVIFLLIFAFQIGVGAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LSHWPTVDGRYSAAAHFTAWGVLLALQLASAVWYVWPARGAGQAH
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA