| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116689299
Identifier: 116689299
GI number: 116689299
Start: 1406909
End: 1407556
Strand: Direct
Name: 116689299
Synonym: Bcen2424_1277
Alternate gene names: NA
Gene position: 1406909-1407556 (Clockwise)
Preceding gene: 116689298
Following gene: 116689301
Centisome position: 40.38
GC content: 71.6
Gene sequence:
>648_bases GTGATCGAAAGCAGTTTTGCCGATCGCGCCGATGCCGGTCGCCAACTGGCCGATGCGTTGCGCGAATACGCGGGGCGAAG CGATGTCGTCGTGCTTGCGCTGCCGCGCGGCGGTGTGCCCGTCGCGTATCCGGTCGCCCGTGCGCTGCGCGTGCCGCTCG ACGTGCTGGTCGTGCGCAAGCTCGGCGTGCCGTTCGACCCCGAGCTCGCGATGGGCGCGATCGCGACGGGCGGCGGGACG CATCTGCAACGTTCGGTGATCCGCGCCATGGACGTATCCGATGCACAACTCGCCGACGTGATCGCGCGCGAGACGGCCGA ACTGCATCGTCGCGAGGCGCTGTATCGCGGCGCGGTGCCGCCGCTGGCGGTGGAAGGGCGCATCGCGATCGTGGTCGACG ACGGCGTCGCGACCGGCGCGACGATGCGCGTCGCGCTGCAGGCGCTGCGCGAGCGTCACCCGGCGCGCATCGTCGCGGCC GTGCCGGTTGCGCCGGCGGGTGCCGTGCATGCGTTCGACGGTCTGGCCGATGCATTCGTCACGGTGTCGCAGCCGGCGCG GTTCTTCGGGATCAGCCAGTTCTACGCGCGCTTCGAGCAGACGAGCGACGACGAGGTGCGCGCGCTGCTCGACGCCGCGC GCCCGTGA
Upstream 100 bases:
>100_bases CCGGTGTGACCCTGCTTGCATCGGCGCGACCGATGAACCATCCTCGTTGACAGGCGCCGGCGCGGCTTTCGCACATCGGC GCAACGGCAGGGAGTCGATC
Downstream 100 bases:
>100_bases CGCGGCGTCAGGTTTGCCGGTTTCGGCGCGGGCGTGGTCGGCCGGCTTCCGCGAGCGCGAACACGCGCTGCAGCGCCGGA TGGACGTTGCCGTGCCAGCG
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MIESSFADRADAGRQLADALREYAGRSDVVVLALPRGGVPVAYPVARALRVPLDVLVVRKLGVPFDPELAMGAIATGGGT HLQRSVIRAMDVSDAQLADVIARETAELHRREALYRGAVPPLAVEGRIAIVVDDGVATGATMRVALQALRERHPARIVAA VPVAPAGAVHAFDGLADAFVTVSQPARFFGISQFYARFEQTSDDEVRALLDAARP
Sequences:
>Translated_215_residues MIESSFADRADAGRQLADALREYAGRSDVVVLALPRGGVPVAYPVARALRVPLDVLVVRKLGVPFDPELAMGAIATGGGT HLQRSVIRAMDVSDAQLADVIARETAELHRREALYRGAVPPLAVEGRIAIVVDDGVATGATMRVALQALRERHPARIVAA VPVAPAGAVHAFDGLADAFVTVSQPARFFGISQFYARFEQTSDDEVRALLDAARP >Mature_215_residues MIESSFADRADAGRQLADALREYAGRSDVVVLALPRGGVPVAYPVARALRVPLDVLVVRKLGVPFDPELAMGAIATGGGT HLQRSVIRAMDVSDAQLADVIARETAELHRREALYRGAVPPLAVEGRIAIVVDDGVATGATMRVALQALRERHPARIVAA VPVAPAGAVHAFDGLADAFVTVSQPARFFGISQFYARFEQTSDDEVRALLDAARP
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007815 - InterPro: IPR000836 [H]
Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 22826; Mature: 22826
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESSFADRADAGRQLADALREYAGRSDVVVLALPRGGVPVAYPVARALRVPLDVLVVRK CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHH LGVPFDPELAMGAIATGGGTHLQRSVIRAMDVSDAQLADVIARETAELHRREALYRGAVP CCCCCCCCHHHHEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PLAVEGRIAIVVDDGVATGATMRVALQALRERHPARIVAAVPVAPAGAVHAFDGLADAFV CEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH TVSQPARFFGISQFYARFEQTSDDEVRALLDAARP HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MIESSFADRADAGRQLADALREYAGRSDVVVLALPRGGVPVAYPVARALRVPLDVLVVRK CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHH LGVPFDPELAMGAIATGGGTHLQRSVIRAMDVSDAQLADVIARETAELHRREALYRGAVP CCCCCCCCHHHHEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PLAVEGRIAIVVDDGVATGATMRVALQALRERHPARIVAAVPVAPAGAVHAFDGLADAFV CEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH TVSQPARFFGISQFYARFEQTSDDEVRALLDAARP HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]