| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yibF [C]
Identifier: 116689301
GI number: 116689301
Start: 1408955
End: 1409584
Strand: Direct
Name: yibF [C]
Synonym: Bcen2424_1279
Alternate gene names: 116689301
Gene position: 1408955-1409584 (Clockwise)
Preceding gene: 116689299
Following gene: 116689302
Centisome position: 40.44
GC content: 68.73
Gene sequence:
>630_bases ATGAAGCTGATCGGCATGCTGGATTCCCCGTTCGTGCGCCGCGTCGCCATTTCGGCGAAGCTGCTCGACCTGCCGTTCGA ACACGAGTCGATCTCGGTGTTTCGTCATATCGAGCGGTTCAGGACGCTCAACCCGGTCGTCAAGGCGCCGACGCTCGTGA CCGACGGCGGCGCGACGCTGCTCGACTCGTCGCTGATCGTCGACTATCTCGACCACCTGGCCGCGCCGGAGCGGCGCCTG CTGCCCGACGCCGTCGAGGCCCGGCTGCGCGCGCTGGTGCCGATCGGGTTCGCGCTGGCCGCGGCCGAGAAAACCGTGCA GGTCGTCTACGAGCAGGCGCTGCGCCCGTCGGACAAGCAGCACGAACCGTGGGTCGATCGCGTGCTGAGCCAGCTCGAAG GTGCATACGGCGCGCTGGAGCCGCTGATCGCGGCCGCCAACGGCTGGTTCGGCGGCGCGCGATTGTTGCAGTCGGACGTG ACGGTCGCGGTGGCGTGGCGCTTCACGCAATTCATGGCGGCCGATTACCCGGTGCTGGCGCGGATCGATCCGGCCCGTTA TCCGGCGCTCGCCGCGCATTCCGCGCGGGCCGAAGCGTTGCCGGCTTTCGTCGAAACGCCGCTCGTCTAG
Upstream 100 bases:
>100_bases CGGCCGGCTGATGCGCGTCAAGCTCAGGGGGCACGCTAGGCGCTGCCGGCCGCCGCTGCTACAGTCGTCAGGCCCATTCC CTCGAAGCGGAGCGTTCGCG
Downstream 100 bases:
>100_bases GTTTCGAAGCGGGGCGCCGGACTGTCGCGCACCGCTGTCGGCCGCCGCTCGCCCTTGTCCGGCAAGCCGCTGCCGATTGT TCTCGGCGGCTGACAAGTGA
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain Protein; Glutathione Transferase; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain; S-Transferase; Glutathione S-Transferase-Like; Glutathione S-Transferase C-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Related Protein; Glutathione S-Transferase Like Protein
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKLIGMLDSPFVRRVAISAKLLDLPFEHESISVFRHIERFRTLNPVVKAPTLVTDGGATLLDSSLIVDYLDHLAAPERRL LPDAVEARLRALVPIGFALAAAEKTVQVVYEQALRPSDKQHEPWVDRVLSQLEGAYGALEPLIAAANGWFGGARLLQSDV TVAVAWRFTQFMAADYPVLARIDPARYPALAAHSARAEALPAFVETPLV
Sequences:
>Translated_209_residues MKLIGMLDSPFVRRVAISAKLLDLPFEHESISVFRHIERFRTLNPVVKAPTLVTDGGATLLDSSLIVDYLDHLAAPERRL LPDAVEARLRALVPIGFALAAAEKTVQVVYEQALRPSDKQHEPWVDRVLSQLEGAYGALEPLIAAANGWFGGARLLQSDV TVAVAWRFTQFMAADYPVLARIDPARYPALAAHSARAEALPAFVETPLV >Mature_209_residues MKLIGMLDSPFVRRVAISAKLLDLPFEHESISVFRHIERFRTLNPVVKAPTLVTDGGATLLDSSLIVDYLDHLAAPERRL LPDAVEARLRALVPIGFALAAAEKTVQVVYEQALRPSDKQHEPWVDRVLSQLEGAYGALEPLIAAANGWFGGARLLQSDV TVAVAWRFTQFMAADYPVLARIDPARYPALAAHSARAEALPAFVETPLV
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22916; Mature: 22916
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIGMLDSPFVRRVAISAKLLDLPFEHESISVFRHIERFRTLNPVVKAPTLVTDGGATL CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHCCEEEECCCHHH LDSSLIVDYLDHLAAPERRLLPDAVEARLRALVPIGFALAAAEKTVQVVYEQALRPSDKQ HHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HEPWVDRVLSQLEGAYGALEPLIAAANGWFGGARLLQSDVTVAVAWRFTQFMAADYPVLA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEE RIDPARYPALAAHSARAEALPAFVETPLV EECCHHCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKLIGMLDSPFVRRVAISAKLLDLPFEHESISVFRHIERFRTLNPVVKAPTLVTDGGATL CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHCCEEEECCCHHH LDSSLIVDYLDHLAAPERRLLPDAVEARLRALVPIGFALAAAEKTVQVVYEQALRPSDKQ HHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HEPWVDRVLSQLEGAYGALEPLIAAANGWFGGARLLQSDVTVAVAWRFTQFMAADYPVLA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEE RIDPARYPALAAHSARAEALPAFVETPLV EECCHHCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA