Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689290

Identifier: 116689290

GI number: 116689290

Start: 1399114

End: 1399881

Strand: Direct

Name: 116689290

Synonym: Bcen2424_1268

Alternate gene names: NA

Gene position: 1399114-1399881 (Clockwise)

Preceding gene: 116689289

Following gene: 116689291

Centisome position: 40.16

GC content: 69.66

Gene sequence:

>768_bases
ATGCTGCAGATGCTCGAAAAAACCGTCGCCCACAACGGGCTCGTCGCGTCGTTCGCGCTGGTCGGCCTGATCATGTGGCT
GTCGTCGATCGCGTCGCGCAAGCTCACGTTCGGCCGCGTGCACGGCTCGGCGATCGCGATCGTCATCGGTCTCGTGCTCG
CCTACGTCGGCGGCGCATTCACCGGCGGCGAGAAGGGGCTGGCCGACGTCAAGCTGTTCGCCGGTATCGGCCTGATGGGC
GGCGCGATGCTGCGCGATTTCGCGATCGTCGCGACCGCGTTCGAAGTACAGCCGACCGAGGCGCGCAAGGCCGGGCTCGT
CGGCGTCGTGTCGCTGCTGCTCGGCACCGTGCTGCCGTTCATCGTCGGCGCGTGCGTCGCGCGCGCGTTCGGCTACACCG
ACGCGGTCAGCATGACGACGATCGGCGCGGGCGCCGTCACCTATATCGTCGGGCCCGTTACGGGCGCGGCGATCGGTGCG
AGCTCCGACGTGATCGCGCTCAGCATCGCGACCGGGCTCGTGAAGGCGATCATCGTGATGGTCGGCACGCCGGTCGCGGC
CAACTTCATGGGCCTGAAAACGCCGCGCTCCGCGATGATCTTCGGCGGGCTGGCCGGCACCGTCAGCGGCGTGAGCGCGG
GCCTTGCCGCGACCGATCGCCGGCTCGTGCCGTACGGTGCGCTGGTCGCGACGTTCCATACCGGCGTCGGCTGCCTGCTC
GGGCCGTCGGTACTGTTCTTCACGACGCGCGCGCTGGTCGGCGCGTAG

Upstream 100 bases:

>100_bases
CGATCTGCGCATGCTGCATTGCGGTACTCGCGCGCACGGGGCGCGACGACACGGCCTTCGCGGGCGTGCCGCAATTCGAA
GAACAATAACGGAGGCCGCC

Downstream 100 bases:

>100_bases
GGCCCTGCGACGCGGCCCGCGCGCGGGCCGCATCCATCGCCGCGTCCTCTGAGTCGCATTCTGCAACATCATCAATCGGC
GGCGGCGCCAGGCTTAGAAT

Product: malonate transporter, MadM subunit

Products: NA

Alternate protein names: Malonate/Sodium Symporter MadM Subunit; Malonate Transporter; Malonate Transporter Subunit MadM; MalonateSodium Symporter Subunit MadM; Malonate Transporter-Like Membrane Protein; Facilitator Superfamily Transporter; Malonate Transporter M Subunit; Signal Transduction Histidine Kinase LytS

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLQMLEKTVAHNGLVASFALVGLIMWLSSIASRKLTFGRVHGSAIAIVIGLVLAYVGGAFTGGEKGLADVKLFAGIGLMG
GAMLRDFAIVATAFEVQPTEARKAGLVGVVSLLLGTVLPFIVGACVARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA
SSDVIALSIATGLVKAIIVMVGTPVAANFMGLKTPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALVATFHTGVGCLL
GPSVLFFTTRALVGA

Sequences:

>Translated_255_residues
MLQMLEKTVAHNGLVASFALVGLIMWLSSIASRKLTFGRVHGSAIAIVIGLVLAYVGGAFTGGEKGLADVKLFAGIGLMG
GAMLRDFAIVATAFEVQPTEARKAGLVGVVSLLLGTVLPFIVGACVARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA
SSDVIALSIATGLVKAIIVMVGTPVAANFMGLKTPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALVATFHTGVGCLL
GPSVLFFTTRALVGA
>Mature_255_residues
MLQMLEKTVAHNGLVASFALVGLIMWLSSIASRKLTFGRVHGSAIAIVIGLVLAYVGGAFTGGEKGLADVKLFAGIGLMG
GAMLRDFAIVATAFEVQPTEARKAGLVGVVSLLLGTVLPFIVGACVARAFGYTDAVSMTTIGAGAVTYIVGPVTGAAIGA
SSDVIALSIATGLVKAIIVMVGTPVAANFMGLKTPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALVATFHTGVGCLL
GPSVLFFTTRALVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25517; Mature: 25517

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHCC
>Mature Secondary Structure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CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA