| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689289
Identifier: 116689289
GI number: 116689289
Start: 1398707
End: 1399102
Strand: Direct
Name: 116689289
Synonym: Bcen2424_1267
Alternate gene names: NA
Gene position: 1398707-1399102 (Clockwise)
Preceding gene: 116689286
Following gene: 116689290
Centisome position: 40.15
GC content: 69.44
Gene sequence:
>396_bases ATGATCATCTACGGAACCGCGCTGCTGGCGTTCTGCCACCTGGCCGGACTGTTCCTCGGCGACCTGCTCGGCAGCGCGAT CGGCGTGAAGACCAACGTCGGCGGCGTCGGCATCGCGATGCTGCTGCTGATCTGCCTGCGCCTGTGGCTGCACCGGCGCG GCTGGCTGCCGAAGGAGACCGAGGCGGGCGTCGGTTTCTGGGGCGCGATGTACATCCCGGTCGTCGTCGCGATGGCCGCG AACCAGAACGTCGTCGCCGCGCTCAAGGGCGGGCCGGTCGCGCTGCTGGCCGCGGTCGGCGCGGTCGCGATCTGCGCATG CTGCATTGCGGTACTCGCGCGCACGGGGCGCGACGACACGGCCTTCGCGGGCGTGCCGCAATTCGAAGAACAATAA
Upstream 100 bases:
>100_bases GCGCCCCGCCGCAGGAGACAGACAGTCCGCCCGGGATCGGCGTGCGGGCCTGACTCCCGCATGCGTCAGGCGCCCGTCAC GAAGAGACTGGAGACGACTC
Downstream 100 bases:
>100_bases CGGAGGCCGCCATGCTGCAGATGCTCGAAAAAACCGTCGCCCACAACGGGCTCGTCGCGTCGTTCGCGCTGGTCGGCCTG ATCATGTGGCTGTCGTCGAT
Product: malonate transporter MadL subunit
Products: NA
Alternate protein names: Malonate Transporter; Malonate/Sodium Symporter MadL Subunit; Malonate Transporter L Subunit; Malonate Transporter Subunit; Malonate Transporter Subunit MadL; Malonate Carrier Protein
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MIIYGTALLAFCHLAGLFLGDLLGSAIGVKTNVGGVGIAMLLLICLRLWLHRRGWLPKETEAGVGFWGAMYIPVVVAMAA NQNVVAALKGGPVALLAAVGAVAICACCIAVLARTGRDDTAFAGVPQFEEQ
Sequences:
>Translated_131_residues MIIYGTALLAFCHLAGLFLGDLLGSAIGVKTNVGGVGIAMLLLICLRLWLHRRGWLPKETEAGVGFWGAMYIPVVVAMAA NQNVVAALKGGPVALLAAVGAVAICACCIAVLARTGRDDTAFAGVPQFEEQ >Mature_131_residues MIIYGTALLAFCHLAGLFLGDLLGSAIGVKTNVGGVGIAMLLLICLRLWLHRRGWLPKETEAGVGFWGAMYIPVVVAMAA NQNVVAALKGGPVALLAAVGAVAICACCIAVLARTGRDDTAFAGVPQFEEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13552; Mature: 13552
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYGTALLAFCHLAGLFLGDLLGSAIGVKTNVGGVGIAMLLLICLRLWLHRRGWLPKET CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC EAGVGFWGAMYIPVVVAMAANQNVVAALKGGPVALLAAVGAVAICACCIAVLARTGRDDT CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AFAGVPQFEEQ CCCCCCCCCCC >Mature Secondary Structure MIIYGTALLAFCHLAGLFLGDLLGSAIGVKTNVGGVGIAMLLLICLRLWLHRRGWLPKET CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC EAGVGFWGAMYIPVVVAMAANQNVVAALKGGPVALLAAVGAVAICACCIAVLARTGRDDT CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AFAGVPQFEEQ CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA