| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mltB [H]
Identifier: 116689079
GI number: 116689079
Start: 1170278
End: 1171243
Strand: Reverse
Name: mltB [H]
Synonym: Bcen2424_1056
Alternate gene names: 116689079
Gene position: 1171243-1170278 (Counterclockwise)
Preceding gene: 116689081
Following gene: 116689062
Centisome position: 33.62
GC content: 65.73
Gene sequence:
>966_bases ATGGTGAGCCGCAACGGCTTCGATTCGGCGAGCCTGCATGCGCTGTTCTCGCGCATCAGCTACTCGGCGACGGCCGTCAA GCTCGTGAGGCCGGCCCCGACGCCCTCGGTCAAGAACTGGCGCGTCTATCGCTCGCGCTTCATCGAACCGATCCGCATCA ACGCGGGCGTGAAGTTCTGGAAGGCGAACCAGGCGGCGCTGCAGCGCGCGTCCGAGCAGTTCGGCGTGCCGCCCGAGGTG ATCGTCGGCATCATCGGCGTCGAAACCATCTATGGCCGCTACATGGGCAATTTCCGCGTGCTGGACGCGCTGACGACGCT AACATTCGACTACCCGGACACGCCGAATCGCGACAGCCGCCAGGCCACCTTCCGCAAGAACCTCGAAGACTTCCTGGTCT GGACCCGCGACAACCAGCTCGACCCGACCACCGTGCTCGGCTCGTACACCGGCGCGATCGGGATTCCGCAGTTCCTGCCG AGCAGCATCCGCGAATATGCGGTCGACTTCGACGGCACGGGCCACGTCGATCTGCGCAGCAGTCCTGTCGATGCGATCGG CAGCGTCGCGAACTACCTGAAGCAGCACGGCTGGGAAACCGACCGACCGGTGGTCTGGCAGATCACGCCGGACACGGGCA GTCTGGGCATCGCACAGGCCGCCGCCGACGGCCAGCCCGAACCGCACTGGGCGCTGTCGCAACTGCTGCGCGCCGGCATG ACGCTGAACGAGCCGACGGTCAACATCACGACCGAAGCCGGCACGCCGGTGACGGTCGTCGACCTGCCGACGCCGGGGCG TGCGACCGAATATATGCTCGGCCTGAAGAACTTCTATGTGTTGACGCGCTACAACCGCAGTTTCTTCTACGCACTCACCG TGTACCAGCTCGGCGAAGCCGTGAAGGCGCAGATGGAAGCCAGTGGCGCGCTGCCACCCGCCGCTGCCGACGAGCAGCCG CAGTAA
Upstream 100 bases:
>100_bases CCAGCCGCAGCAGCCGACGCCGCAAGGCCAGACCTTCGAAGAGGAAATCGTTCCACAGCGTTACGCGAGCAACGCGAAGG TCGATGCATTCATCGACGAG
Downstream 100 bases:
>100_bases GCGCTGGCCGCCCAAAGAAAAAGCGCCGCAGAAGCGGCGCTTTTTTTATCGATGCGCGCCTCGCGCACCGATCTCGCTCA GGCGGGAAACACACCCGTGG
Product: lytic murein transglycosylase B
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MVSRNGFDSASLHALFSRISYSATAVKLVRPAPTPSVKNWRVYRSRFIEPIRINAGVKFWKANQAALQRASEQFGVPPEV IVGIIGVETIYGRYMGNFRVLDALTTLTFDYPDTPNRDSRQATFRKNLEDFLVWTRDNQLDPTTVLGSYTGAIGIPQFLP SSIREYAVDFDGTGHVDLRSSPVDAIGSVANYLKQHGWETDRPVVWQITPDTGSLGIAQAAADGQPEPHWALSQLLRAGM TLNEPTVNITTEAGTPVTVVDLPTPGRATEYMLGLKNFYVLTRYNRSFFYALTVYQLGEAVKAQMEASGALPPAAADEQP Q
Sequences:
>Translated_321_residues MVSRNGFDSASLHALFSRISYSATAVKLVRPAPTPSVKNWRVYRSRFIEPIRINAGVKFWKANQAALQRASEQFGVPPEV IVGIIGVETIYGRYMGNFRVLDALTTLTFDYPDTPNRDSRQATFRKNLEDFLVWTRDNQLDPTTVLGSYTGAIGIPQFLP SSIREYAVDFDGTGHVDLRSSPVDAIGSVANYLKQHGWETDRPVVWQITPDTGSLGIAQAAADGQPEPHWALSQLLRAGM TLNEPTVNITTEAGTPVTVVDLPTPGRATEYMLGLKNFYVLTRYNRSFFYALTVYQLGEAVKAQMEASGALPPAAADEQP Q >Mature_321_residues MVSRNGFDSASLHALFSRISYSATAVKLVRPAPTPSVKNWRVYRSRFIEPIRINAGVKFWKANQAALQRASEQFGVPPEV IVGIIGVETIYGRYMGNFRVLDALTTLTFDYPDTPNRDSRQATFRKNLEDFLVWTRDNQLDPTTVLGSYTGAIGIPQFLP SSIREYAVDFDGTGHVDLRSSPVDAIGSVANYLKQHGWETDRPVVWQITPDTGSLGIAQAAADGQPEPHWALSQLLRAGM TLNEPTVNITTEAGTPVTVVDLPTPGRATEYMLGLKNFYVLTRYNRSFFYALTVYQLGEAVKAQMEASGALPPAAADEQP Q
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=313, Percent_Identity=43.4504792332268, Blast_Score=227, Evalue=7e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 35404; Mature: 35404
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRNGFDSASLHALFSRISYSATAVKLVRPAPTPSVKNWRVYRSRFIEPIRINAGVKFW CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCEEEE KANQAALQRASEQFGVPPEVIVGIIGVETIYGRYMGNFRVLDALTTLTFDYPDTPNRDSR ECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHEEECCCCCCCCCCH QATFRKNLEDFLVWTRDNQLDPTTVLGSYTGAIGIPQFLPSSIREYAVDFDGTGHVDLRS HHHHHHCHHHHEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCEEECC SPVDAIGSVANYLKQHGWETDRPVVWQITPDTGSLGIAQAAADGQPEPHWALSQLLRAGM CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCC TLNEPTVNITTEAGTPVTVVDLPTPGRATEYMLGLKNFYVLTRYNRSFFYALTVYQLGEA CCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHEEEEEEECCEEEEEHHHHHHHHH VKAQMEASGALPPAAADEQPQ HHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVSRNGFDSASLHALFSRISYSATAVKLVRPAPTPSVKNWRVYRSRFIEPIRINAGVKFW CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCEEEE KANQAALQRASEQFGVPPEVIVGIIGVETIYGRYMGNFRVLDALTTLTFDYPDTPNRDSR ECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHEEECCCCCCCCCCH QATFRKNLEDFLVWTRDNQLDPTTVLGSYTGAIGIPQFLPSSIREYAVDFDGTGHVDLRS HHHHHHCHHHHEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCEEECC SPVDAIGSVANYLKQHGWETDRPVVWQITPDTGSLGIAQAAADGQPEPHWALSQLLRAGM CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCHHHHHHHHCCC TLNEPTVNITTEAGTPVTVVDLPTPGRATEYMLGLKNFYVLTRYNRSFFYALTVYQLGEA CCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHEEEEEEECCEEEEEHHHHHHHHH VKAQMEASGALPPAAADEQPQ HHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]