Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689064

Identifier: 116689064

GI number: 116689064

Start: 1155141

End: 1155740

Strand: Direct

Name: 116689064

Synonym: Bcen2424_1041

Alternate gene names: NA

Gene position: 1155141-1155740 (Clockwise)

Preceding gene: 116689063

Following gene: 116689065

Centisome position: 33.16

GC content: 61.33

Gene sequence:

>600_bases
ATGCAAAAGCAATTCAAGCAACTGGTTCTGCTGGCTGCACTGGTGCCGACGTTCGCGATGGCGCAAGCGCTGTCGAATTC
CGCACCGGCAGCTCCGGCGGCAGCTGCGCCGATCGACGCCGACAAGAAGGCAGCGATCAAGGATCTGCTCGACGCGATCG
ACGCGCCGAAGCTCGTGTCGGCAATCGGCAACAGCGCCGAAATGCAGGCCAAGCAGCTCGTGCCGGCCATCCTGTCGGAC
GCGCTGTCGGAAAACAAGACGCTGAACGACAAGCAGAAGCAGGCTGCCGTTCCGACGCTGCAGAAGAACGCGGTGCCGAA
GCTGGTCGACGGCGCAGGCAAGGTGTTCGGCACGCAGCAGTTCCAGAGCGACGCGATGTCGGCTCAGTACGACGCATACG
CGAAGTACTACAGCACGTCGGAGATCAAGGATCTGACGACGTTCTACAAGAGCCCGACGGGCCGCAAGTTCATCCAGGTT
CAGGATCAGGTCGGTCGCGACGTGGTCAACGGCCTGATGCAGAAGTACATGCCGCAAGCGATCCAGGCAACGCGTACGCA
GGCTGACAAGGAAGTCGCAGCAGTCAAGCCGGGCAAGTAA

Upstream 100 bases:

>100_bases
CGGACGGCGAAGCCTGAAGAACGGATGAGACTCTGGCCGCCGCGGGCGAAAAGCGCCGCGGCCGGCGAGCAACCATTCAT
ATTTCCAAAAGGGAGTGATG

Downstream 100 bases:

>100_bases
GCTGTCCGGGCACGCCTCCGGCCGTTCGGCCGGGTTTGGCGGGAGCCTGACGACAGTGCGATAATGGCCGTTTGCGCGCG
AGCGCAAGCGGCCATTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQKQFKQLVLLAALVPTFAMAQALSNSAPAAPAAAAPIDADKKAAIKDLLDAIDAPKLVSAIGNSAEMQAKQLVPAILSD
ALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQQFQSDAMSAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQV
QDQVGRDVVNGLMQKYMPQAIQATRTQADKEVAAVKPGK

Sequences:

>Translated_199_residues
MQKQFKQLVLLAALVPTFAMAQALSNSAPAAPAAAAPIDADKKAAIKDLLDAIDAPKLVSAIGNSAEMQAKQLVPAILSD
ALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQQFQSDAMSAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQV
QDQVGRDVVNGLMQKYMPQAIQATRTQADKEVAAVKPGK
>Mature_199_residues
MQKQFKQLVLLAALVPTFAMAQALSNSAPAAPAAAAPIDADKKAAIKDLLDAIDAPKLVSAIGNSAEMQAKQLVPAILSD
ALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQQFQSDAMSAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQV
QDQVGRDVVNGLMQKYMPQAIQATRTQADKEVAAVKPGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21288; Mature: 21288

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQFKQLVLLAALVPTFAMAQALSNSAPAAPAAAAPIDADKKAAIKDLLDAIDAPKLVS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
AIGNSAEMQAKQLVPAILSDALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQQ
HHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH
FQSDAMSAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQVQDQVGRDVVNGLMQKYMPQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IQATRTQADKEVAAVKPGK
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQKQFKQLVLLAALVPTFAMAQALSNSAPAAPAAAAPIDADKKAAIKDLLDAIDAPKLVS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
AIGNSAEMQAKQLVPAILSDALSENKTLNDKQKQAAVPTLQKNAVPKLVDGAGKVFGTQQ
HHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH
FQSDAMSAQYDAYAKYYSTSEIKDLTTFYKSPTGRKFIQVQDQVGRDVVNGLMQKYMPQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IQATRTQADKEVAAVKPGK
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA