| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is fbp [H]
Identifier: 116689037
GI number: 116689037
Start: 1119711
End: 1120724
Strand: Reverse
Name: fbp [H]
Synonym: Bcen2424_1014
Alternate gene names: 116689037
Gene position: 1120724-1119711 (Counterclockwise)
Preceding gene: 116689038
Following gene: 116689036
Centisome position: 32.17
GC content: 64.5
Gene sequence:
>1014_bases ATGTCCATTGCCCGCCGCACCACGCTGTCGAAGTTCCTGATCGAACAGCAACGTGAGACCAACAACCTCCCCGCCGACCT GCGCCTGCTGATCGAAGTCGTCGCCCGCGCGTGCAAGGCGATCAGCTACAACGTGTCGAAGGGCGCGCTCGGCGACGCGC TCGGCACCGCCGGCAGCGAGAACGTCCAGGGCGAAGTGCAGAAGAAGCTCGACATCCTGTCGAACGAGATCCTGCTCGAC GCGAACGAATGGGGCGGCAACCTCGCCGCGATGGCATCGGAAGAAATGGAAACGTTCTTCCCGATCCCGGCGAACTACCC GCGCGGCGAATACCTGCTCGTGTTCGATCCGCTCGACGGCTCGTCGAACATCGACGTGAACGTGTCGATCGGCACGATCT TCTCGGTGCTGCGCTGCCCGGACGGCAAGCAGGCGACCGAGGAGTCGTTCCTGCAGCCCGGCACCGAGCAGGTCGCGGCC GGCTACGCCGTGTACGGCCCGCAGACGGTGTTCGTGCTGACGACCGGCAACGGCGTGAACTGCTTCACGCTCGACCGCGA AGTCGGCTCGTGGGTGCTCACGCAGAGCAACATGCAGATCCCGGCCGACACGCGCGAATACGCGATCAACGCATCGAACG CACGCCACTGGTACGACCCGGTCAAGCGCTACGTCGACGAGCTGAACGCCGGCAAGGACGGCCCGCGCGGCGACAACTTC AACATGCGCTGGATCGCGTCGATGGTGGCCGACGTGCACCGGATCCTGAATCGCGGCGGCATCTTCATGTACCCGGCCGA CAAGCGCACGCCCGATCGTCCGGGCAAGCTGCGTCTGATGTATGAAGCAAACCCGATGTCGTTCATCGTCGAACAGGCGG GCGGCGCAGCGACGACCGGCACGCAGCGCATCATGGAAGTGCAGCCCACCGGCCTGCACCAGCGCGTGCCCGTGTTCCTC GGTTCGAAGAACGAAGTCAAGCGCGTGACCGGCTATCACGACGAAGCAAAATAA
Upstream 100 bases:
>100_bases GGCCCGGCCATGTAACCGGACGAAAAAAGCCGGCGGCACCGAAGGCGCGACGGGTAAAATTGCGGCCATTCAAGGATTCT TTGGCCTTTCGGAGTCTGTC
Downstream 100 bases:
>100_bases TTGCACTGCAGCACTGGACGAGGGTGCGAGACATCAGTACAATCGCGCCTTCGCGATGTGGCCCTAACGGGTCGCGTCGC AGTGAAGTGAAAGCGGAAAG
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSIARRTTLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLD ANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTEQVAA GYAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNMQIPADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNF NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGTQRIMEVQPTGLHQRVPVFL GSKNEVKRVTGYHDEAK
Sequences:
>Translated_337_residues MSIARRTTLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLD ANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTEQVAA GYAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNMQIPADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNF NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGTQRIMEVQPTGLHQRVPVFL GSKNEVKRVTGYHDEAK >Mature_336_residues SIARRTTLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLDA NEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTEQVAAG YAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNMQIPADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNFN MRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGTQRIMEVQPTGLHQRVPVFLG SKNEVKRVTGYHDEAK
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI22907028, Length=321, Percent_Identity=42.3676012461059, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI189083692, Length=319, Percent_Identity=42.3197492163009, Blast_Score=249, Evalue=2e-66, Organism=Homo sapiens, GI16579888, Length=319, Percent_Identity=42.3197492163009, Blast_Score=249, Evalue=2e-66, Organism=Escherichia coli, GI1790679, Length=324, Percent_Identity=44.7530864197531, Blast_Score=274, Evalue=6e-75, Organism=Caenorhabditis elegans, GI17508131, Length=325, Percent_Identity=43.0769230769231, Blast_Score=271, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6323409, Length=326, Percent_Identity=39.8773006134969, Blast_Score=256, Evalue=5e-69, Organism=Drosophila melanogaster, GI45550998, Length=325, Percent_Identity=44, Blast_Score=262, Evalue=2e-70, Organism=Drosophila melanogaster, GI19921562, Length=325, Percent_Identity=44, Blast_Score=262, Evalue=3e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 37126; Mature: 36995
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIARRTTLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSE CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC NVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHEECCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTEQVAAGYAVYGPQTVFVLTTGNGVN CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCEEEECCCEEEEEECCCCEE CFTLDREVGSWVLTQSNMQIPADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNF EEEECCCCCCEEEECCCCCCCCCCHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCEEHEECCCCCCCCC TQRIMEVQPTGLHQRVPVFLGSKNEVKRVTGYHDEAK CHHEEEECCCCCCCCCCEEECCCCHHHHHCCCCCCCC >Mature Secondary Structure SIARRTTLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSE CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC NVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHEECCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTEQVAAGYAVYGPQTVFVLTTGNGVN CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCEEEECCCEEEEEECCCCEE CFTLDREVGSWVLTQSNMQIPADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNF EEEECCCCCCEEEECCCCCCCCCCHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC NMRWIASMVADVHRILNRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCEEHEECCCCCCCCC TQRIMEVQPTGLHQRVPVFLGSKNEVKRVTGYHDEAK CHHEEEECCCCCCCCCCEEECCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA