| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689036
Identifier: 116689036
GI number: 116689036
Start: 1118936
End: 1119406
Strand: Reverse
Name: 116689036
Synonym: Bcen2424_1013
Alternate gene names: NA
Gene position: 1119406-1118936 (Counterclockwise)
Preceding gene: 116689037
Following gene: 116689035
Centisome position: 32.13
GC content: 64.12
Gene sequence:
>471_bases ATGCTTGTCAGGCCTTTTCTCTTTTCCGGCGCCGAAATCCTGCAGTCCCTCGGCGACGCACTGTCCCATCACACAGTCCA CGATCTTCGCGTCCGCGTTCGGCAACCGCATGCGCACGTTGTCCGTCGCGATCATCGTGGCGGCACATTGTCTGCGCAAC CCCGCCGACACCTCCGCACGACATTTCCCCCCATTCACGCCCGTCGATCGCATCGGCCGCCCCTCGCGGTACGCGACGGC ACGACCTCCCGCGGCCATGACGACGAAGGCCGGCTGCTCGACGTGAATGCAACGGCATCCTCATCTCGTGCAGCCCGACG GGCCCGTGCTCGCCCCCGGCACGACGCACACGCAGGCGACATGGCCGTCACACTCGATCGCCTGCTCACCCTGCATCGCG CGCGCACGAGCCGTGCCGTACCCAGACAAATCCCCTGGAAAATCTGCTTAAGGGTGCATAACATTACTTAA
Upstream 100 bases:
>100_bases CTGCCGGTGTAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATCTCCGGCACCAAG ATATAAAGGCCTGACAAGCG
Downstream 100 bases:
>100_bases CGATCCTGACCCGTCTATCGCGTTACATTGCGTGGGCGGCGCGACGGCCGCATGCCGCTTTCAACCCGCTTGCGGCGTGC GACAGCCGGTGCCCGGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MLVRPFLFSGAEILQSLGDALSHHTVHDLRVRVRQPHAHVVRRDHRGGTLSAQPRRHLRTTFPPIHARRSHRPPLAVRDG TTSRGHDDEGRLLDVNATASSSRAARRARARPRHDAHAGDMAVTLDRLLTLHRARTSRAVPRQIPWKICLRVHNIT
Sequences:
>Translated_156_residues MLVRPFLFSGAEILQSLGDALSHHTVHDLRVRVRQPHAHVVRRDHRGGTLSAQPRRHLRTTFPPIHARRSHRPPLAVRDG TTSRGHDDEGRLLDVNATASSSRAARRARARPRHDAHAGDMAVTLDRLLTLHRARTSRAVPRQIPWKICLRVHNIT >Mature_156_residues MLVRPFLFSGAEILQSLGDALSHHTVHDLRVRVRQPHAHVVRRDHRGGTLSAQPRRHLRTTFPPIHARRSHRPPLAVRDG TTSRGHDDEGRLLDVNATASSSRAARRARARPRHDAHAGDMAVTLDRLLTLHRARTSRAVPRQIPWKICLRVHNIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17669; Mature: 17669
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRPFLFSGAEILQSLGDALSHHTVHDLRVRVRQPHAHVVRRDHRGGTLSAQPRRHLRT CCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHC TFPPIHARRSHRPPLAVRDGTTSRGHDDEGRLLDVNATASSSRAARRARARPRHDAHAGD CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCH MAVTLDRLLTLHRARTSRAVPRQIPWKICLRVHNIT HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCC >Mature Secondary Structure MLVRPFLFSGAEILQSLGDALSHHTVHDLRVRVRQPHAHVVRRDHRGGTLSAQPRRHLRT CCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHC TFPPIHARRSHRPPLAVRDGTTSRGHDDEGRLLDVNATASSSRAARRARARPRHDAHAGD CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCH MAVTLDRLLTLHRARTSRAVPRQIPWKICLRVHNIT HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA