| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ymgE [C]
Identifier: 116689035
GI number: 116689035
Start: 1118553
End: 1118807
Strand: Reverse
Name: ymgE [C]
Synonym: Bcen2424_1012
Alternate gene names: 116689035
Gene position: 1118807-1118553 (Counterclockwise)
Preceding gene: 116689036
Following gene: 116689031
Centisome position: 32.11
GC content: 64.31
Gene sequence:
>255_bases ATGACTCATGGCTTGATTATGTGGCTCATCATCGGCGCGATCGCCGGTTGGCTTGCCGGCTTGCTCGTGAAGGGCGGCGG CTTCGGGCTGATCGTCGACATCATCGTCGGGATCGTCGGTGCGGTGATCGGCGGCTGGCTTGCCGGGCTGCTCGGCATCA GCATCGGCAGCGGCTTCATCGGCTCGGTGATCGTCGCGGTCATCGGCGCGGTGATCCTGCTGTTCGTGATCCGGCTATTC AGGCGAGCGGCCTGA
Upstream 100 bases:
>100_bases TGCGTGGGCGGCGCGACGGCCGCATGCCGCTTTCAACCCGCTTGCGGCGTGCGACAGCCGGTGCCCGGTCATTTCGACTC AACCCAAGGAGAGGACCACC
Downstream 100 bases:
>100_bases CGTTTCTCTCCACGCGCCTTCGGGCGCGTTTTCGCATCGGGCGCGGCGCGCGGCCGGTTCGCCACGCGCCACCAGCTCCG TCAGCGCTTCGCGTGCCGCA
Product: transglycosylase-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MTHGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLAGLLGISIGSGFIGSVIVAVIGAVILLFVIRLF RRAA
Sequences:
>Translated_84_residues MTHGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLAGLLGISIGSGFIGSVIVAVIGAVILLFVIRLF RRAA >Mature_83_residues THGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLAGLLGISIGSGFIGSVIVAVIGAVILLFVIRLFR RAA
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8466; Mature: 8334
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLAGLLGISIGSGFI CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH GSVIVAVIGAVILLFVIRLFRRAA HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure THGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLAGLLGISIGSGFI CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH GSVIVAVIGAVILLFVIRLFRRAA HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA