Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688942

Identifier: 116688942

GI number: 116688942

Start: 1027520

End: 1027801

Strand: Direct

Name: 116688942

Synonym: Bcen2424_0919

Alternate gene names: NA

Gene position: 1027520-1027801 (Clockwise)

Preceding gene: 116688940

Following gene: 116688945

Centisome position: 29.49

GC content: 57.45

Gene sequence:

>282_bases
TTGGATTGGGCTTGCCCGGTTAGTCAGCGCGCTGGTTATCCGGGCCGACCCATCTTGGCCCACCAGTTAGGTCAGATCCT
TATCGGACGCGGTGACCTCGCAGCGGAAACCTGCAGCGTCGAGTTCATCGGCCAAGTCCTTCAGGGCACGGTTTGCTGCA
TCCTGATCGTGATTTGCATCATGCGGGAGAACGTTGACAGTTCGCAGCACGTTGGGCGCGATCTCATGCAAGTGAATCTC
GACAGAGCCTTTCCGCAAAACCTGAGTGCGGCCGTCAATTAG

Upstream 100 bases:

>100_bases
CAGGGGTTTGGGTGGGGATGGCAAGCGGGTGGTTTCGGGCGGTGGCAGCGAAACTGGCATGGCTGCTTGATGGAGCGGTG
GCGTCGCTGGCAATGGATGA

Downstream 100 bases:

>100_bases
ATGTCTGGTTGGATCAAGAAGCGAAAGCTTCCAGGTCGGCAGGGTCGTACTGATCTGGCTCAACAGGTTTTCGTTGGCCT
CTCCATAAATCAGGACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICIMRENVDSSQHVGRDLMQVNL
DRAFPQNLSAAVN

Sequences:

>Translated_93_residues
MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICIMRENVDSSQHVGRDLMQVNL
DRAFPQNLSAAVN
>Mature_93_residues
MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICIMRENVDSSQHVGRDLMQVNL
DRAFPQNLSAAVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10094; Mature: 10094

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICI
CCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MRENVDSSQHVGRDLMQVNLDRAFPQNLSAAVN
HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICI
CCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MRENVDSSQHVGRDLMQVNLDRAFPQNLSAAVN
HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA