| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is gpmB [H]
Identifier: 116688708
GI number: 116688708
Start: 763985
End: 764650
Strand: Direct
Name: gpmB [H]
Synonym: Bcen2424_0685
Alternate gene names: 116688708
Gene position: 763985-764650 (Clockwise)
Preceding gene: 116688707
Following gene: 116688719
Centisome position: 21.93
GC content: 67.72
Gene sequence:
>666_bases ATGGCCACCACGCAGATTCTTTTCATCCGCCATGGCGAGACGGCCTGGAACCGCATCAAGCGCATCCAGGGGCATATCGA CATCCCGTTGGCCGACACGGGGCTCGCGCAGGCGCAGCGGCTGGCGGCGCGGCTCGCGCGGGAGGCACGTGATGGCGCGC GGATCGACGCGGTGTATTCGAGCGACCTGATGCGCGCACAACAGACCGCCCAACCGTTCGCCGATGCGCTCGGGCTGCCG CTGCTGCTGCGCGAAGGGTTGCGCGAACGCTCGTACGGTGCGTTCCAGGGGCACGACAGCACCGAGATCGAGGCGCTGTT TCCGGACGCGTATGCGGCGTGGCAGACACGCGACCCGGGCTTCGCGCCGGAGGGGGGCGAGTCGCAGCGTGAGTTCTATC ACCGCGTGCTGCATGCGCTCGAACCGATCGTCGCCGCGCATCCGGGCGGCCGGATCGCGTGCGTCGCGCACGGCGGCGTG CTCGATTGCGTGTATCGCTTCGCGAACGGGATCGAGCTGTCGGCGCCGCGTACCTATCAGCTGCTCAACACCAGCATCAA TGTCGTCGATTACGTCGATGGCCGCGCGCAAGTCGTGCGGTGGGCCGACGTGTCGCATCTCGAAGCCGCGAGCGACGATG ACGACGGGTACCGCAAGGTGCTTTGA
Upstream 100 bases:
>100_bases GCGAGTTCGGCGCCGACATGCAGGTGTCGCTCGTCAACGACGGCCCCGTGACGTTCTGGCTGCAAGTGCGGCCCTGATTC TTTCCCGGAGGCGCGCCGCG
Downstream 100 bases:
>100_bases GCATGCGAACCCCGTCCGGCATGGCATGGCCGGGCCGGGGTTGCTTCCTTCTGGCGTGACGCTTATTGCGGCAGCGCGTG GCGCGTCTTGTAGTCGAGCG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MATTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQAQRLAARLAREARDGARIDAVYSSDLMRAQQTAQPFADALGLP LLLREGLRERSYGAFQGHDSTEIEALFPDAYAAWQTRDPGFAPEGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGV LDCVYRFANGIELSAPRTYQLLNTSINVVDYVDGRAQVVRWADVSHLEAASDDDDGYRKVL
Sequences:
>Translated_221_residues MATTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQAQRLAARLAREARDGARIDAVYSSDLMRAQQTAQPFADALGLP LLLREGLRERSYGAFQGHDSTEIEALFPDAYAAWQTRDPGFAPEGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGV LDCVYRFANGIELSAPRTYQLLNTSINVVDYVDGRAQVVRWADVSHLEAASDDDDGYRKVL >Mature_220_residues ATTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQAQRLAARLAREARDGARIDAVYSSDLMRAQQTAQPFADALGLPL LLREGLRERSYGAFQGHDSTEIEALFPDAYAAWQTRDPGFAPEGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGVL DCVYRFANGIELSAPRTYQLLNTSINVVDYVDGRAQVVRWADVSHLEAASDDDDGYRKVL
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=221, Percent_Identity=35.2941176470588, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786970, Length=112, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6324857, Length=211, Percent_Identity=30.8056872037915, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24407; Mature: 24275
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQAQRLAARLAREARDGARIDAVYS CCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHH SDLMRAQQTAQPFADALGLPLLLREGLRERSYGAFQGHDSTEIEALFPDAYAAWQTRDPG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCCCCC FAPEGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGVLDCVYRFANGIELSAPRTYQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEE LLNTSINVVDYVDGRAQVVRWADVSHLEAASDDDDGYRKVL HHHCCCCEEEECCCCEEEEEECCCHHHCCCCCCCCCHHHCC >Mature Secondary Structure ATTQILFIRHGETAWNRIKRIQGHIDIPLADTGLAQAQRLAARLAREARDGARIDAVYS CCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHH SDLMRAQQTAQPFADALGLPLLLREGLRERSYGAFQGHDSTEIEALFPDAYAAWQTRDPG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCCCCC FAPEGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGVLDCVYRFANGIELSAPRTYQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEE LLNTSINVVDYVDGRAQVVRWADVSHLEAASDDDDGYRKVL HHHCCCCEEEECCCCEEEEEECCCHHHCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA