| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is leuS [H]
Identifier: 116688677
GI number: 116688677
Start: 726316
End: 728910
Strand: Direct
Name: leuS [H]
Synonym: Bcen2424_0654
Alternate gene names: 116688677
Gene position: 726316-728910 (Clockwise)
Preceding gene: 116688676
Following gene: 116688678
Centisome position: 20.85
GC content: 65.97
Gene sequence:
>2595_bases ATGCACGAGAGATACGTACCCGCCGACGTCGAAGCCGCCGCCCAGGGCGACTGGCGCGCAGCCGATGCCTACAAGACGAA GGAAGATTCGCAGAAGCCGAAGTTCTACTGCGTATCGATGCTGCCGTACCCGTCCGGCAAGCTGCACATGGGTCACGTGC GCAACTACACGATCAACGACGTGATGTACCGCTATCTGCGGATGAACGGCTACAACACGCTGATGCCGATGGGCTGGGAT GCGTTCGGGATGCCGGCCGAGAACGCCGCGATGGCGAACGGCGTGCCGCCCGCGAAGTGGACCTACGACAACATCGACTA CATGAAGGGCCAGATGCAGTCGATGGGTCTCGCGATCGACTGGTCGCGCGAAATCGCGACGTGCAAGCCCGACTACTACA AGTGGAACCAGTGGCTGTTCCTGAAGATGCTCGAGAAGGGCATCGCGTACAAGAAGACGGGCACCGTGAACTGGGACCCG GTCGACCAGACCGTGCTCGCGAACGAGCAGGTGATCGACGGCCGCGGCTGGCGCTCGGGCGCGCTCGTCGAGAAGCGCGA GATCCCGATGTACTACCTGCGCATCACGCAGTACGCGGATGAGCTGCTGAACGATCTCGACGGCCTCGGCTGGCCCGAGC GCGTGAAGATCATGCAGCAGAACTGGATCGGCAAGAGCTTCGGCGTGAACTTCGGCTTCCCGTACGAACTCGACGGCGAG CAGAAGCTGCTGCGCGTGTTCACGACGCGCGCCGACACGATCATGGGCGTCACGTTCTGCGCGATCGCGGCCGAGCACCC GCTCGCCACGCGCCTCGCGCAGGACAAGCCGGAACTGCTCGCGTTCATCGAGGAATGCAAGCGCGGCGGCGTCGCCGAGG CCGACGTCGCGACGATGGAGAAGAAGGGCGTCGCGACCGGCTTCTCGGTCAAGCACCCGCTGACCGGCGAGCCGGTCGAG GTGTGGATCGGCAACTACGTGCTGATGAGCTATGGCGAAGGCGCGGTGATGGGCGTGCCGGGTCACGACGAGCGCGATTT CGCGTTCGCGAAGAAATACGATCTGCCGATCAGGCAGGTGATCGCGAGCGAAGGGCAGACGTACTCGCTCGACGCATGGC AGGAGTGGTACGGCGACAAGGAAACCGCGGTCTGCGTGAACAGCGGCAAGTACGACGGCCTGCGCTACGCGGAAGCGGTC GACGCGGTCGCGGCCGACCTGAAGGCCGGCGGCTTCGGCGACAAGCAGGTCACGTGGCGCCTGCGCGACTGGGGCGTGTC GCGCCAGCGCTACTGGGGCACGCCGATCCCGATCATCCACTGCCCGTCGTGCGGCGACGTGCCGGTGCCGGAGCAGGATC TGCCGGTCGTGCTGCCGGAAGACCTCGTGCCGGACGGCTCGGGCAACCCGCTCGCGAAGTCGGAAGCGTTCCTGAACTGC ACGTGCCCGAAGTGTGGCGCGGCCGCGAAGCGCGAAACCGACACGATGGACACCTTCGTCGATTCGTCGTGGTACTTCTC GCGCTACACGGCGCCGGACGCCGAGACGATGGTCGACGCGCGCACCGACTACTGGATGCCGATGGACCAGTACATCGGCG GCATCGAGCACGCGATCCTGCATCTGCTGTATTCGCGCTTCTGGACTAAGGTGATGCGTGATCTCGGCCTCGTGAAGTTC GGCGAGCCGGCGAAGAACCTGCTCACGCAGGGGATGGTGCTGAACGAGACGTACTACCGCGAAGACGCGGCGGGCAAGAA GACCTGGTACAACCCGCTCGACGTGACGGTCACGCACGACGACAAGGGCCGCCCGGTCGGCGCGACGCTGAACGCGGACG GCCAGCCGGTCGTGCTCGGCGGCATCGAGAAGATGTCGAAGTCGAAGAACAACGGCGTCGATCCGCAACTGCTGATCGAC CAGTACGGCGCCGATACCGCGCGTCTGTTCACGATGTTCGCCGCACCGCCCGAGCAGCAGCTCGAGTGGTCGGGCGCGGG CGTCGAGGGCGCGAGCCGCTTCCTGCGCCGCGTGTGGAGCTTCGGCTACGGTAACCGCGAAGCGCTCGCCGCGCGCGCCG GTTTCGACGCCGCGACGCTCGGCGATGCCGACAAGGCGTTGCGCCGCGAGATCTACAGCGTGCTGAAGCAGGCCGATTTC GACTACCAGCGCCTGCAGTACAACACGGTCGTGTCGGCCGCGATGAAGATGCTGAACGCGATCGACGGCGCAAAGGGTGC GACGCCCGCCGTGCTGCGCGAGACGTACGGCGTGTTGCTGCGCGTGCTGTATCCGGTCGTGCCGCACGTCACGTTCGAGC TGTGGAAGACGCTCGGCTACGCGGACGAATTCGGCGCGCTGCTCGATGCGCCGTGGCCGAAGGTCGACGAGGCCGCGCTC GAGCAGGCCGAGATCGAACTCGTGCTGCAGGTGAACGGCAAGGTGCGCGGCGCGCTGAAGGTCGCGAAGGACGCGAGCCG CGACGCGATCGAAGCGGCGGCGGTGGCCGACGAGGCATTCGCGAAATTCAGCGACGGCAAGCCGGCGAAGAAGATCGTCG TCGTGCCGGGCCGCCTCGTGAACATCGTCGTCTGA
Upstream 100 bases:
>100_bases CCGCCACAGCGAACCTGCAGCGCCGCCGGGCCAGCACGATTTTCGATCCAATCCTGCGCGCGAGCCGTCGCGCCGCTTAA AGCCTAGCCCGAACCACACC
Downstream 100 bases:
>100_bases CGGCCGCCGGCCGTCGGACGTACCCAGAAGGAGCGAAGGTGATCCGCAGATCGTTTTTGATGCTCGTCGGCAGCACGGTC GTGCTGTCGGCATGCGGCTT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 864; Mature: 864
Protein sequence:
>864_residues MHERYVPADVEAAAQGDWRAADAYKTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE QKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLAFIEECKRGGVAEADVATMEKKGVATGFSVKHPLTGEPVE VWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIRQVIASEGQTYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAV DAVAADLKAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETYYREDAAGKKTWYNPLDVTVTHDDKGRPVGATLNADGQPVVLGGIEKMSKSKNNGVDPQLLID QYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFGYGNREALAARAGFDAATLGDADKALRREIYSVLKQADF DYQRLQYNTVVSAAMKMLNAIDGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKTLGYADEFGALLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASRDAIEAAAVADEAFAKFSDGKPAKKIVVVPGRLVNIVV
Sequences:
>Translated_864_residues MHERYVPADVEAAAQGDWRAADAYKTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE QKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLAFIEECKRGGVAEADVATMEKKGVATGFSVKHPLTGEPVE VWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIRQVIASEGQTYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAV DAVAADLKAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETYYREDAAGKKTWYNPLDVTVTHDDKGRPVGATLNADGQPVVLGGIEKMSKSKNNGVDPQLLID QYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFGYGNREALAARAGFDAATLGDADKALRREIYSVLKQADF DYQRLQYNTVVSAAMKMLNAIDGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKTLGYADEFGALLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASRDAIEAAAVADEAFAKFSDGKPAKKIVVVPGRLVNIVV >Mature_864_residues MHERYVPADVEAAAQGDWRAADAYKTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE QKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLAFIEECKRGGVAEADVATMEKKGVATGFSVKHPLTGEPVE VWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIRQVIASEGQTYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAV DAVAADLKAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETYYREDAAGKKTWYNPLDVTVTHDDKGRPVGATLNADGQPVVLGGIEKMSKSKNNGVDPQLLID QYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFGYGNREALAARAGFDAATLGDADKALRREIYSVLKQADF DYQRLQYNTVVSAAMKMLNAIDGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKTLGYADEFGALLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASRDAIEAAAVADEAFAKFSDGKPAKKIVVVPGRLVNIVV
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=868, Percent_Identity=36.405529953917, Blast_Score=529, Evalue=1e-150, Organism=Escherichia coli, GI1786861, Length=874, Percent_Identity=49.7711670480549, Blast_Score=861, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=386, Percent_Identity=23.3160621761658, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71997517, Length=267, Percent_Identity=41.1985018726592, Blast_Score=222, Evalue=8e-58, Organism=Caenorhabditis elegans, GI71997510, Length=267, Percent_Identity=41.1985018726592, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI212645227, Length=338, Percent_Identity=29.2899408284024, Blast_Score=137, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6323414, Length=830, Percent_Identity=40.2409638554217, Blast_Score=557, Evalue=1e-159, Organism=Saccharomyces cerevisiae, GI6321531, Length=957, Percent_Identity=20.7941483803553, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21355409, Length=900, Percent_Identity=34.8888888888889, Blast_Score=447, Evalue=1e-125, Organism=Drosophila melanogaster, GI281366294, Length=482, Percent_Identity=21.1618257261411, Blast_Score=77, Evalue=7e-14,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 96258; Mature: 96258
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHERYVPADVEAAAQGDWRAADAYKTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTIND CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAID HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCEECCCHHHHHHHHHHCCEEEE WSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCCCCCC ALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE CCEECCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCH QKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLAFIEECKRGGVAEADVATME HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH KKGVATGFSVKHPLTGEPVEVWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIRQV HCCCCCCCEECCCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCCCHHHHHCCCHHHHH IASEGQTYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAVDAVAADLKAGGFGDKQVTWR HHCCCCEEECHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE LRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC EHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCCCEEEE TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAIL CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHCHHHHHHH HLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVLNETYYREDAAGKKTWYNPLDVTVTHD HHHHHHHHHHHHHHCCCEECCCHHHHHHHCCEEECHHHHCCCCCCCCCCCCCEEEEEEEC DKGRPVGATLNADGQPVVLGGIEKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQ CCCCCEEEEECCCCCEEEEECHHHHHCCCCCCCCHHHHHHHCCCCHHHHHEEECCCCHHH LEWSGAGVEGASRFLRRVWSFGYGNREALAARAGFDAATLGDADKALRREIYSVLKQADF CEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCC DYQRLQYNTVVSAAMKMLNAIDGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKTLGY CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADEFGALLDAPWPKVDEAALEQAEIELVLQVNGKVRGALKVAKDASRDAIEAAAVADEAF HHHHHHHHCCCCCCCCHHHHHHCCEEEEEEECCCEEEHHHHHHHCCHHHHHHHHHHHHHH AKFSDGKPAKKIVVVPGRLVNIVV HHCCCCCCCCEEEECCCCEEEEEC >Mature Secondary Structure MHERYVPADVEAAAQGDWRAADAYKTKEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTIND CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAID HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCEECCCHHHHHHHHHHCCEEEE WSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCCCCCC ALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE CCEECCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCH QKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLAFIEECKRGGVAEADVATME HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH KKGVATGFSVKHPLTGEPVEVWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIRQV HCCCCCCCEECCCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCCCHHHHHCCCHHHHH IASEGQTYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAVDAVAADLKAGGFGDKQVTWR HHCCCCEEECHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE LRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC EHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCCCEEEE TCPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAIL CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHCHHHHHHH HLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVLNETYYREDAAGKKTWYNPLDVTVTHD HHHHHHHHHHHHHHCCCEECCCHHHHHHHCCEEECHHHHCCCCCCCCCCCCCEEEEEEEC DKGRPVGATLNADGQPVVLGGIEKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQ CCCCCEEEEECCCCCEEEEECHHHHHCCCCCCCCHHHHHHHCCCCHHHHHEEECCCCHHH LEWSGAGVEGASRFLRRVWSFGYGNREALAARAGFDAATLGDADKALRREIYSVLKQADF CEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCC DYQRLQYNTVVSAAMKMLNAIDGAKGATPAVLRETYGVLLRVLYPVVPHVTFELWKTLGY CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADEFGALLDAPWPKVDEAALEQAEIELVLQVNGKVRGALKVAKDASRDAIEAAAVADEAF HHHHHHHHCCCCCCCCHHHHHHCCEEEEEEECCCEEEHHHHHHHCCHHHHHHHHHHHHHH AKFSDGKPAKKIVVVPGRLVNIVV HHCCCCCCCCEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA