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The map label for this gene is 116688678

Identifier: 116688678

GI number: 116688678

Start: 728970

End: 729500

Strand: Direct

Name: 116688678

Synonym: Bcen2424_0655

Alternate gene names: NA

Gene position: 728970-729500 (Clockwise)

Preceding gene: 116688677

Following gene: 116688679

Centisome position: 20.92

GC content: 68.93

Gene sequence:

>531_bases
ATGCTCGTCGGCAGCACGGTCGTGCTGTCGGCATGCGGCTTCCAGTTGCGCGGCCAGCAGGACTACGCGTTCAAGCACCT
GTTCGTGGCCGGTGCGCCGGCGCCCGTCGAGGCGCGGCTGACGCGCCTCGTCCAGGCCGGCAGCGACACGAAGATCGTCA
AGTCGGCGGACGACGCCGACGCCGTGCTGCGCATGTGGGAGTCGCGTGGCCAGAACACGCTGACGCTCAACAAGTACGGC
TCCGCGCAGGAGTACGCGCTGTTCTACACGCTGAACTACACGCTGACGAGCAAGGACGGCACCGTCCTGATTCCGCCGAG
CGCGATCGCGCTGAACCGCGCGATGACGTACAGCGACCAGTACACGAACGCGAAGGCGCAGGAAGCCGACATCCTTTACG
GCGACATGCAGAACGACGCGGTCGACCAGCTGATGCGGCGTCTCGCGATCGTCCACTCGCTGACGCCGGCGCCGGAGGAC
GTGGTGCCGGGCGTGGCGCCGCGCGCGCCGCTGCCGCCGCCGCCGCTCTGA

Upstream 100 bases:

>100_bases
TCGTCGTCGTGCCGGGCCGCCTCGTGAACATCGTCGTCTGACGGCCGCCGGCCGTCGGACGTACCCAGAAGGAGCGAAGG
TGATCCGCAGATCGTTTTTG

Downstream 100 bases:

>100_bases
TCGCGGGCGCACGCAGCGATGCAATTGCGACTTGATGCGCTGGAGCCGCACCTCGCGAAGGGGTTGGCCGGGCTCTATAC
CGTGTACGGCGACGAGCCGC

Product: rare lipoprotein B

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLVGSTVVLSACGFQLRGQQDYAFKHLFVAGAPAPVEARLTRLVQAGSDTKIVKSADDADAVLRMWESRGQNTLTLNKYG
SAQEYALFYTLNYTLTSKDGTVLIPPSAIALNRAMTYSDQYTNAKAQEADILYGDMQNDAVDQLMRRLAIVHSLTPAPED
VVPGVAPRAPLPPPPL

Sequences:

>Translated_176_residues
MLVGSTVVLSACGFQLRGQQDYAFKHLFVAGAPAPVEARLTRLVQAGSDTKIVKSADDADAVLRMWESRGQNTLTLNKYG
SAQEYALFYTLNYTLTSKDGTVLIPPSAIALNRAMTYSDQYTNAKAQEADILYGDMQNDAVDQLMRRLAIVHSLTPAPED
VVPGVAPRAPLPPPPL
>Mature_176_residues
MLVGSTVVLSACGFQLRGQQDYAFKHLFVAGAPAPVEARLTRLVQAGSDTKIVKSADDADAVLRMWESRGQNTLTLNKYG
SAQEYALFYTLNYTLTSKDGTVLIPPSAIALNRAMTYSDQYTNAKAQEADILYGDMQNDAVDQLMRRLAIVHSLTPAPED
VVPGVAPRAPLPPPPL

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19068; Mature: 19068

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVGSTVVLSACGFQLRGQQDYAFKHLFVAGAPAPVEARLTRLVQAGSDTKIVKSADDAD
CCCCHHHHEECCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCHHH
AVLRMWESRGQNTLTLNKYGSAQEYALFYTLNYTLTSKDGTVLIPPSAIALNRAMTYSDQ
HHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCEEEECCCHHHHHHHHCCCCC
YTNAKAQEADILYGDMQNDAVDQLMRRLAIVHSLTPAPEDVVPGVAPRAPLPPPPL
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLVGSTVVLSACGFQLRGQQDYAFKHLFVAGAPAPVEARLTRLVQAGSDTKIVKSADDAD
CCCCHHHHEECCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCHHH
AVLRMWESRGQNTLTLNKYGSAQEYALFYTLNYTLTSKDGTVLIPPSAIALNRAMTYSDQ
HHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCEEEECCCHHHHHHHHCCCCC
YTNAKAQEADILYGDMQNDAVDQLMRRLAIVHSLTPAPEDVVPGVAPRAPLPPPPL
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA