Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688639

Identifier: 116688639

GI number: 116688639

Start: 688250

End: 688651

Strand: Direct

Name: 116688639

Synonym: Bcen2424_0616

Alternate gene names: NA

Gene position: 688250-688651 (Clockwise)

Preceding gene: 116688638

Following gene: 116688640

Centisome position: 19.76

GC content: 73.13

Gene sequence:

>402_bases
ATGAAGAATCGTTTCATCGTCGTTGCCGCGGCGCTCGCATGCGTCGGCGCCGCAGCATCCCTCTCCGCGTTCGCGCAGGC
GAGCGACGCCGCCGCGCCGGCGCGTGCGCGCCAGGCGCAGCTCGGCGATCCGTACGTGCCGCCGGCCGCGCGCCACGCGA
CCGCCGGCACGCAGACGACCGGCGCCGCGCTGCATGCGCAGGTGGTGCGCAAGCTCGCGCGGCAGTTCAGCGCGGCCGAC
ACGCAGAACACGGGGGCGATCACCGAGTCGCAGGCGCGCGCGGCCGGCCTCGGCTATGTCGCGAACCACTTCCGGCAGAT
CGACGCGAGCGGCAACGGCCGCGTGTCGTTCGCCGACGTACAGCGCTACATGCAGGCGCGCAGCAGCACGAGCCAGCAGT
AA

Upstream 100 bases:

>100_bases
TACAGCGCGGCCGCGCACTGATGCGCCCGGCCGGCGACAGGCGCCCTCCGCGGCGCCGCTCGCCGGCCGTCGACGACCTC
ATTCCAGACTGGAGCCTGAC

Downstream 100 bases:

>100_bases
GCGCCGCACGCGGCGAGCAAACGGGGGCGGAACCTGCGGCAGGCGGGTTCCGCCCCCGTGCGCATGGCGCGGCCGACGTG
TCGAACCCGCGGCCAATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKNRFIVVAAALACVGAAASLSAFAQASDAAAPARARQAQLGDPYVPPAARHATAGTQTTGAALHAQVVRKLARQFSAAD
TQNTGAITESQARAAGLGYVANHFRQIDASGNGRVSFADVQRYMQARSSTSQQ

Sequences:

>Translated_133_residues
MKNRFIVVAAALACVGAAASLSAFAQASDAAAPARARQAQLGDPYVPPAARHATAGTQTTGAALHAQVVRKLARQFSAAD
TQNTGAITESQARAAGLGYVANHFRQIDASGNGRVSFADVQRYMQARSSTSQQ
>Mature_133_residues
MKNRFIVVAAALACVGAAASLSAFAQASDAAAPARARQAQLGDPYVPPAARHATAGTQTTGAALHAQVVRKLARQFSAAD
TQNTGAITESQARAAGLGYVANHFRQIDASGNGRVSFADVQRYMQARSSTSQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13730; Mature: 13730

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRFIVVAAALACVGAAASLSAFAQASDAAAPARARQAQLGDPYVPPAARHATAGTQTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCH
GAALHAQVVRKLARQFSAADTQNTGAITESQARAAGLGYVANHFRQIDASGNGRVSFADV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHH
QRYMQARSSTSQQ
HHHHHHHHCCCCC
>Mature Secondary Structure
MKNRFIVVAAALACVGAAASLSAFAQASDAAAPARARQAQLGDPYVPPAARHATAGTQTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCH
GAALHAQVVRKLARQFSAADTQNTGAITESQARAAGLGYVANHFRQIDASGNGRVSFADV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHH
QRYMQARSSTSQQ
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA