Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688638

Identifier: 116688638

GI number: 116688638

Start: 686560

End: 688170

Strand: Direct

Name: 116688638

Synonym: Bcen2424_0615

Alternate gene names: NA

Gene position: 686560-688170 (Clockwise)

Preceding gene: 116688637

Following gene: 116688639

Centisome position: 19.71

GC content: 65.43

Gene sequence:

>1611_bases
ATGCCAGCGAGCAAAGCGAAGCTGTTGTTGGGAGTGGTGTGTTCTTCGCTGATTCTGACGGCCTGCAATGACGACGTGAC
GTCGTCGTCTGCAGCGAGCGCCGCGAATTCAGCCGATCCTGCCGGTCAGGTCGACCGCGCGTACAACGATCCGAACAGTT
ATTCGTCGAGTGCGAACGCGTCGCTCGACGCATCCGCCGCGGTCGAGAAGGCCGCCGTCACGCACCATCAGATCACGCTG
AACGGCAAGACGATCCGGTACACGGCCACCGCCGGCCACCTCGTCGCCCGCAATCCGCAGACGGGCGCGCCCGAAGCCTC
GTTCTTCTACGTCGCCTACACGGCCGACAACCAGCCCGCGGCGAAGCGGCCCGTCACGTTCCTGTACAACGGTGGCCCCG
GTTCGGCCTCGGTGTGGCTGCACCTCGGCTCGTTCGGCCCGCGCCGGATCCAGACCGGCGACCCGAACGCGAACACGTCG
ACGTTCCCGTTCGTCGACAACCAGGAAACCCTGCTCGACACGACCGACCTCGTGTTCGTCGATGCGATCGGCACCGGCTT
CTCCGAAGCGGTCGCGCCGAACACGAACCAGACGTTCTGGGGCGTCGATCAGGACGCCGGCGCGTTCCGCGATTTCGTGA
CGCGCTACCTGAGCGTGAACCAGCGCAGCGCTTCGCCGAAATACCTGTTCGGCGAGTCGTACGGCACGCCGCGCACCGAC
GTGCTCGCGAACCTGCTCGAGACGGCCGGCGTGAAGCTCGACGGCATCGTGCTGCAGTCGTCGATCCTGAACTACAACAC
GAACTGCGACATGGCGAGCGACTATGTCGGCAACTCGAACAACGGCGCGAGCCCGGTGAGCTGCGCGGGCTTCGTGCCGT
CGTACGGCACGGTCGGCGCGTATTACCAGCTCGACAACCCGAACCCGTCGAACCTGCCGCAGTATGCGGACCAGATGCGC
CTGCTGACGGCCGGCAGCTACGCGCCGGCCGTGAACGCGTACCTCGCGAGCCACACGCCGCCGCCGCCGAATCTCGTCAC
GACGATGGCGAATTCGACCGGCGTGAAGCAGGCGTTGTGGAATGCGGACTTCAACGTGGTCCCGACCTTCTTCGACAACA
GCTTCCAGCTGTCGCTGGTGCCGGGCACGCTGATCGGCCGCTACGACGCACGCGTGAACGTGCCGGTGTCGAGCCCGCTC
GCGGCCGACGGCGATCCGTCCAGCTCGTTCATCACGAAACCGTTCACCGACACGATCGGCAGCTACCTGCCGAACGAGCT
GAAGTACACCGCGCAGTCGGCCTACTCGGTAAGCAGCAATGCGATCAACACGTGGGACTGGACGCACGACGGCCTCGCGA
TGCCCGACACGATCCCCGACCTGGCCGCGGCGCTGACGCTGAATCCGCAGCTGAAGGTGCTGTCGCTGAACGGGTATCAC
GACATCGCGACGCCGTTCTACCAGACCGAGCTCGACCTCGCGCGGCTCGGCACGCAACCGAACCTGACGATCAAGGACTA
TCAGGGCGGGCACATGGTCTATCTCGACGATACGTCGCGTCCGCAGGAGAAAGCCGACCTCGTGACCTTCTACAGCGCGG
CCGCGCACTGA

Upstream 100 bases:

>100_bases
TATATTGGCCAGCGCCTCGGCTCATCGGCCGCAATCGAGGCGGGGGGTGGCTTATCCGGCTGCTCGACACAAAAAACATC
CGAGAAGAAGGAACGCAACG

Downstream 100 bases:

>100_bases
TGCGCCCGGCCGGCGACAGGCGCCCTCCGCGGCGCCGCTCGCCGGCCGTCGACGACCTCATTCCAGACTGGAGCCTGACA
TGAAGAATCGTTTCATCGTC

Product: peptidase S10, serine carboxypeptidase

Products: NA

Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; Carboxypeptidase; S10 Family Peptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Peptidase S; Serine Carboxypeptidase Superfamily

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MPASKAKLLLGVVCSSLILTACNDDVTSSSAASAANSADPAGQVDRAYNDPNSYSSSANASLDASAAVEKAAVTHHQITL
NGKTIRYTATAGHLVARNPQTGAPEASFFYVAYTADNQPAAKRPVTFLYNGGPGSASVWLHLGSFGPRRIQTGDPNANTS
TFPFVDNQETLLDTTDLVFVDAIGTGFSEAVAPNTNQTFWGVDQDAGAFRDFVTRYLSVNQRSASPKYLFGESYGTPRTD
VLANLLETAGVKLDGIVLQSSILNYNTNCDMASDYVGNSNNGASPVSCAGFVPSYGTVGAYYQLDNPNPSNLPQYADQMR
LLTAGSYAPAVNAYLASHTPPPPNLVTTMANSTGVKQALWNADFNVVPTFFDNSFQLSLVPGTLIGRYDARVNVPVSSPL
AADGDPSSSFITKPFTDTIGSYLPNELKYTAQSAYSVSSNAINTWDWTHDGLAMPDTIPDLAAALTLNPQLKVLSLNGYH
DIATPFYQTELDLARLGTQPNLTIKDYQGGHMVYLDDTSRPQEKADLVTFYSAAAH

Sequences:

>Translated_536_residues
MPASKAKLLLGVVCSSLILTACNDDVTSSSAASAANSADPAGQVDRAYNDPNSYSSSANASLDASAAVEKAAVTHHQITL
NGKTIRYTATAGHLVARNPQTGAPEASFFYVAYTADNQPAAKRPVTFLYNGGPGSASVWLHLGSFGPRRIQTGDPNANTS
TFPFVDNQETLLDTTDLVFVDAIGTGFSEAVAPNTNQTFWGVDQDAGAFRDFVTRYLSVNQRSASPKYLFGESYGTPRTD
VLANLLETAGVKLDGIVLQSSILNYNTNCDMASDYVGNSNNGASPVSCAGFVPSYGTVGAYYQLDNPNPSNLPQYADQMR
LLTAGSYAPAVNAYLASHTPPPPNLVTTMANSTGVKQALWNADFNVVPTFFDNSFQLSLVPGTLIGRYDARVNVPVSSPL
AADGDPSSSFITKPFTDTIGSYLPNELKYTAQSAYSVSSNAINTWDWTHDGLAMPDTIPDLAAALTLNPQLKVLSLNGYH
DIATPFYQTELDLARLGTQPNLTIKDYQGGHMVYLDDTSRPQEKADLVTFYSAAAH
>Mature_535_residues
PASKAKLLLGVVCSSLILTACNDDVTSSSAASAANSADPAGQVDRAYNDPNSYSSSANASLDASAAVEKAAVTHHQITLN
GKTIRYTATAGHLVARNPQTGAPEASFFYVAYTADNQPAAKRPVTFLYNGGPGSASVWLHLGSFGPRRIQTGDPNANTST
FPFVDNQETLLDTTDLVFVDAIGTGFSEAVAPNTNQTFWGVDQDAGAFRDFVTRYLSVNQRSASPKYLFGESYGTPRTDV
LANLLETAGVKLDGIVLQSSILNYNTNCDMASDYVGNSNNGASPVSCAGFVPSYGTVGAYYQLDNPNPSNLPQYADQMRL
LTAGSYAPAVNAYLASHTPPPPNLVTTMANSTGVKQALWNADFNVVPTFFDNSFQLSLVPGTLIGRYDARVNVPVSSPLA
ADGDPSSSFITKPFTDTIGSYLPNELKYTAQSAYSVSSNAINTWDWTHDGLAMPDTIPDLAAALTLNPQLKVLSLNGYHD
IATPFYQTELDLARLGTQPNLTIKDYQGGHMVYLDDTSRPQEKADLVTFYSAAAH

Specific function: Unknown

COG id: COG2939

COG function: function code E; Carboxypeptidase C (cathepsin A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57071; Mature: 56940

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASKAKLLLGVVCSSLILTACNDDVTSSSAASAANSADPAGQVDRAYNDPNSYSSSANA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCC
SLDASAAVEKAAVTHHQITLNGKTIRYTATAGHLVARNPQTGAPEASFFYVAYTADNQPA
CCCHHHHHHHHHEEEEEEEECCCEEEEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCC
AKRPVTFLYNGGPGSASVWLHLGSFGPRRIQTGDPNANTSTFPFVDNQETLLDTTDLVFV
CCCCEEEEECCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCEECCCHHHCCCCCEEEE
DAIGTGFSEAVAPNTNQTFWGVDQDAGAFRDFVTRYLSVNQRSASPKYLFGESYGTPRTD
EECCCCCHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHH
VLANLLETAGVKLDGIVLQSSILNYNTNCDMASDYVGNSNNGASPVSCAGFVPSYGTVGA
HHHHHHHHCCCEEEEEEEEHHHHCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCEE
YYQLDNPNPSNLPQYADQMRLLTAGSYAPAVNAYLASHTPPPPNLVTTMANSTGVKQALW
EEEECCCCCCCCHHHHHHHEEEECCCCCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHHH
NADFNVVPTFFDNSFQLSLVPGTLIGRYDARVNVPVSSPLAADGDPSSSFITKPFTDTIG
CCCCCEEEEEECCCEEEEEECCEEEEEECCEEECCCCCCCCCCCCCCCCEEECCHHHHHH
SYLPNELKYTAQSAYSVSSNAINTWDWTHDGLAMPDTIPDLAAALTLNPQLKVLSLNGYH
HHCCCHHHHHHHHHEECCCCCEECCCCCCCCCCCCCCCHHHHHEEEECCCEEEEEECCCC
DIATPFYQTELDLARLGTQPNLTIKDYQGGHMVYLDDTSRPQEKADLVTFYSAAAH
CCCCCHHHHCHHHHHCCCCCCEEEEECCCCEEEEECCCCCCHHHHHEEEEEHHHCC
>Mature Secondary Structure 
PASKAKLLLGVVCSSLILTACNDDVTSSSAASAANSADPAGQVDRAYNDPNSYSSSANA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCC
SLDASAAVEKAAVTHHQITLNGKTIRYTATAGHLVARNPQTGAPEASFFYVAYTADNQPA
CCCHHHHHHHHHEEEEEEEECCCEEEEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCC
AKRPVTFLYNGGPGSASVWLHLGSFGPRRIQTGDPNANTSTFPFVDNQETLLDTTDLVFV
CCCCEEEEECCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCEECCCHHHCCCCCEEEE
DAIGTGFSEAVAPNTNQTFWGVDQDAGAFRDFVTRYLSVNQRSASPKYLFGESYGTPRTD
EECCCCCHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHH
VLANLLETAGVKLDGIVLQSSILNYNTNCDMASDYVGNSNNGASPVSCAGFVPSYGTVGA
HHHHHHHHCCCEEEEEEEEHHHHCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCEE
YYQLDNPNPSNLPQYADQMRLLTAGSYAPAVNAYLASHTPPPPNLVTTMANSTGVKQALW
EEEECCCCCCCCHHHHHHHEEEECCCCCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHHH
NADFNVVPTFFDNSFQLSLVPGTLIGRYDARVNVPVSSPLAADGDPSSSFITKPFTDTIG
CCCCCEEEEEECCCEEEEEECCEEEEEECCEEECCCCCCCCCCCCCCCCEEECCHHHHHH
SYLPNELKYTAQSAYSVSSNAINTWDWTHDGLAMPDTIPDLAAALTLNPQLKVLSLNGYH
HHCCCHHHHHHHHHEECCCCCEECCCCCCCCCCCCCCCHHHHHEEEECCCEEEEEECCCC
DIATPFYQTELDLARLGTQPNLTIKDYQGGHMVYLDDTSRPQEKADLVTFYSAAAH
CCCCCHHHHCHHHHHCCCCCCEEEEECCCCEEEEECCCCCCHHHHHEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA