| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is mtgA [H]
Identifier: 116688637
GI number: 116688637
Start: 685399
End: 686136
Strand: Direct
Name: mtgA [H]
Synonym: Bcen2424_0614
Alternate gene names: 116688637
Gene position: 685399-686136 (Clockwise)
Preceding gene: 116688636
Following gene: 116688638
Centisome position: 19.67
GC content: 67.75
Gene sequence:
>738_bases GTGGTGGCGGTGAGCGGCACGCAGCGCACGCGGACGGTGAGCCTCGCTCGCTGGGCCGTCTACGCGGGCTCGGTGTTCGC GGGCGCATGGCTCGCGACGCAGCTGTTCTATCTCGCGCAGATCGCGCTGTGGTTGTTCGTGAACCCGGGCTCGACCGCGT TCATGCGCACCGACGCGTGGTGGCTGTCGCGCGACACGCCGCCCGCGCAGATCCGGCACCAGTGGGTGCCGTACGACCAG ATCTCGCGCAACCTGAAGCGCGCGCTGATCGCGTCCGAGGATTCGACCTTCGCGACCAACAACGGCTACGACGTCGACGC AATCCTGCAGGCGTGGGAGAAGAACAAGGCGCGCGGCAGGATCGTCGCGGGCGGTTCGACGATCACGCAGCAGCTCGCCC GCAACCTGTTCCTGTCGCGCGAGAAGAGCTACATCCGCAAGGGGCAGGAGCTGATCATCACGTGGATGCTCGAAACGGTG CTCGACAAGGAGCGCATTTTCGAGATCTACCTGAATTCGGTCGAATGGGGGCGCGGCGTGTACGGCGCCGAAGCGGCCGC ACGCTATTACTACAAGATTCCCGCGAGCCGGCTCGGCGCGTGGCAGTCGGCGCGTCTCGCGGTGATGCTGCCGAAGCCGC GCTGGTTCGATGCGCATCGCGGCTCGGCCTACCAGGCCCAGCGCGCGGCGGTCATCGCGCGCCGGATGGGCGCGGCCGAG TTGCCGCAATCGGAGTGA
Upstream 100 bases:
>100_bases CCGAGTCGTTCTTCATCTGGCGCGGCGTGCGGCCGGACGGCGCACCGGTGCTGGCCGCGCTGCGCCAGGCGCTCGCGGCG AGCTGAACGGAGCGCGGCAC
Downstream 100 bases:
>100_bases GCGGCAGCGCTGCTGCATTGTCCATTCCGCCGTCGAGGCACGATTGGTGCGCTGCAGCGCATGCGTGTCGCGACCATTTC GGGTCACATCCGTTAGACGA
Product: monofunctional biosynthetic peptidoglycan transglycosylase
Products: NA
Alternate protein names: Monofunctional TGase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MVAVSGTQRTRTVSLARWAVYAGSVFAGAWLATQLFYLAQIALWLFVNPGSTAFMRTDAWWLSRDTPPAQIRHQWVPYDQ ISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGRIVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETV LDKERIFEIYLNSVEWGRGVYGAEAAARYYYKIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE LPQSE
Sequences:
>Translated_245_residues MVAVSGTQRTRTVSLARWAVYAGSVFAGAWLATQLFYLAQIALWLFVNPGSTAFMRTDAWWLSRDTPPAQIRHQWVPYDQ ISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGRIVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETV LDKERIFEIYLNSVEWGRGVYGAEAAARYYYKIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE LPQSE >Mature_245_residues MVAVSGTQRTRTVSLARWAVYAGSVFAGAWLATQLFYLAQIALWLFVNPGSTAFMRTDAWWLSRDTPPAQIRHQWVPYDQ ISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGRIVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETV LDKERIFEIYLNSVEWGRGVYGAEAAARYYYKIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE LPQSE
Specific function: Cell wall formation [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 51 family [H]
Homologues:
Organism=Escherichia coli, GI1789601, Length=162, Percent_Identity=44.4444444444444, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI87082258, Length=161, Percent_Identity=36.0248447204969, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1786343, Length=162, Percent_Identity=33.9506172839506, Blast_Score=88, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001264 - InterPro: IPR011812 [H]
Pfam domain/function: PF00912 Transgly [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 27768; Mature: 27768
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVSGTQRTRTVSLARWAVYAGSVFAGAWLATQLFYLAQIALWLFVNPGSTAFMRTDAW CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCE WLSRDTPPAQIRHQWVPYDQISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGR EECCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCCE IVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETVLDKERIFEIYLNSVEWGRGV EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YGAEAAARYYYKIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE CCHHHHHHHEEECCHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LPQSE CCCCC >Mature Secondary Structure MVAVSGTQRTRTVSLARWAVYAGSVFAGAWLATQLFYLAQIALWLFVNPGSTAFMRTDAW CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCE WLSRDTPPAQIRHQWVPYDQISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGR EECCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCCE IVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETVLDKERIFEIYLNSVEWGRGV EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YGAEAAARYYYKIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE CCHHHHHHHEEECCHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LPQSE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA