| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688521
Identifier: 116688521
GI number: 116688521
Start: 555832
End: 556722
Strand: Direct
Name: 116688521
Synonym: Bcen2424_0497
Alternate gene names: NA
Gene position: 555832-556722 (Clockwise)
Preceding gene: 116688520
Following gene: 116688524
Centisome position: 15.95
GC content: 66.33
Gene sequence:
>891_bases ATGTCGAACAAGACCCACGAAATCCGCCCGGAGCAGTCCGTCGAGCTGCTGAAGGAACTGCACATCCTCACCCGCGACGG CAAGCTGAACCAGGACAGTCGCCGCAAGCTGAAGCAGGTCTATCACCTGTTCCAGTTCATCGAGCCGCTGCTCGCCGGCG TGCAGGCCGACAAAGGCCACGTGACGCTCGTCGATCACGGTGCCGGCAAGTCGTATCTCGGCTTCATCCTGTACGACCTG TTCTTCAAGCAGCAGCCGGGGCACGGCACGCCGGCGTTCGCGTCGCACGTGTACGGCATCGAGACGCGCGAGGAACTCGT CACGCGCTCGACCGAGCTCGCCGCGCGGCTCGGGTTCGGCGGCATGTCGTTCCTGAACCTGTCGGTCGCCGATTCGATCA CGTCACCGCAACTGCCCGACACGGTCGACGTCGTCACCGCGCTGCACGCGTGCGACACGGCGACCGACGACGCGATCCGC TTTGCGCTCGCGAAGCGCGCGCAGCACATCGTGCTGGTGCCGTGCTGTCAGGCGGAAGTCGCGGGCGTGCTGCGCAAGAA CAAGGGCAAGTCGCTCGCGAATGCGCTGACCGAGGTGTGGCGGCACCCGCTGCATACGCGCGAATTCGGCAGCCAGATCA CCAACGTGCTGCGCTGCCTGCAGCTCGAGGCGCACGGCTACCAGGTCAGCGTGACCGAGCTGGTCGGCTGGGAGCATTCG ATGAAGAACGAGCTGATCATCGCGCAGTACAAGAACCTGCCGCGCCGCAAGCCCGGCGAGCGGCTCAACGAGATCCTCGG GATGTTCGGGCTCGCCGAGCTGAACGAGCGCTTCTTCGTCGCGCAAGCCGCTGCGGCGGGCGACGCCGCCGTCGAGCCGG CCGAAGGCTGA
Upstream 100 bases:
>100_bases CCCGGGCCTGACCGCGTATTTTCGGTAAACTGTCGCCATTCCTCACGAATTTCCGCCGCCGGGCCGTGGTCGACCGACCG TGGCCCGGCGGCGCTTCACG
Downstream 100 bases:
>100_bases CGGCGCGGGTGCGCGGGCATGGCGCCCGCGCGGCACACGTCACACGTCGTCGCCCGGCCGGCGCATCCATTCGCGCCAGC CTTCGTGGCCGAGGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSNKTHEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLAGVQADKGHVTLVDHGAGKSYLGFILYDL FFKQQPGHGTPAFASHVYGIETREELVTRSTELAARLGFGGMSFLNLSVADSITSPQLPDTVDVVTALHACDTATDDAIR FALAKRAQHIVLVPCCQAEVAGVLRKNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHS MKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVAQAAAAGDAAVEPAEG
Sequences:
>Translated_296_residues MSNKTHEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLAGVQADKGHVTLVDHGAGKSYLGFILYDL FFKQQPGHGTPAFASHVYGIETREELVTRSTELAARLGFGGMSFLNLSVADSITSPQLPDTVDVVTALHACDTATDDAIR FALAKRAQHIVLVPCCQAEVAGVLRKNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHS MKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVAQAAAAGDAAVEPAEG >Mature_295_residues SNKTHEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLAGVQADKGHVTLVDHGAGKSYLGFILYDLF FKQQPGHGTPAFASHVYGIETREELVTRSTELAARLGFGGMSFLNLSVADSITSPQLPDTVDVVTALHACDTATDDAIRF ALAKRAQHIVLVPCCQAEVAGVLRKNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHSM KNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVAQAAAAGDAAVEPAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32771; Mature: 32640
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKTHEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLAGVQADKGH CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VTLVDHGAGKSYLGFILYDLFFKQQPGHGTPAFASHVYGIETREELVTRSTELAARLGFG EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC GMSFLNLSVADSITSPQLPDTVDVVTALHACDTATDDAIRFALAKRAQHIVLVPCCQAEV CHHHEEEHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCHHHH AGVLRKNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHS HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHH MKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVAQAAAAGDAAVEPAEG HCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SNKTHEIRPEQSVELLKELHILTRDGKLNQDSRRKLKQVYHLFQFIEPLLAGVQADKGH CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VTLVDHGAGKSYLGFILYDLFFKQQPGHGTPAFASHVYGIETREELVTRSTELAARLGFG EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCC GMSFLNLSVADSITSPQLPDTVDVVTALHACDTATDDAIRFALAKRAQHIVLVPCCQAEV CHHHEEEHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCHHHH AGVLRKNKGKSLANALTEVWRHPLHTREFGSQITNVLRCLQLEAHGYQVSVTELVGWEHS HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHH MKNELIIAQYKNLPRRKPGERLNEILGMFGLAELNERFFVAQAAAAGDAAVEPAEG HCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA