| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688520
Identifier: 116688520
GI number: 116688520
Start: 554549
End: 555742
Strand: Direct
Name: 116688520
Synonym: Bcen2424_0496
Alternate gene names: NA
Gene position: 554549-555742 (Clockwise)
Preceding gene: 116688519
Following gene: 116688521
Centisome position: 15.92
GC content: 72.11
Gene sequence:
>1194_bases ATGGTGTGGTCCGCGCGGCGAATTCTCGCCGCCGCTGAAGCCAACCGTAACCGAGTTCGCGTGACCGATTCCCCCGTTTT CCACTGGACCGACGCCGACGGCGTCGATCATGCCGTGCGCTGGCGCTCCGAAGCCGGCGTGCAACCGCCGAAGCGCGCGG TGCCCGCCGACGACCGCCTCACCGCCGACGCGGCCTACCGTCTCGCCTGCGAGGGCACCGCGCTCGTCTGGCAGGGCGAC TTTCAGAATGCGCGCCAGCTCGTGCAGGCGATGGCGCGCCGTGTCGAACGCAAGCCGAAGAAGGCGAAAGCCGCGGCCGG CGTCGAAGCATTCAACCTGCATCGTCTCGCGCAATCGCAGCGCGCCCGCACGCTCGGCATGCTGCTGATCCCGCTCGACG CCGATTACACGATCCCGCTGCGCCGTGCGCCCGACGTGCGTGCGGCCTGCGAGGAGGCGTACGGTCCCGGCGGCGCGCCG TCGGTCGTGTCGCTGCGCGAACTGCTTGGCCTCGTCGGCGCGCACGAGTGGCGCAAGAAGGGCGTGCCGATCCCGGCGCT CGGCGGCGCGCCGATCCATCCGCACTACGGCGTGTTTTCGCCGGTGCGCGGCGAATACGTGGAGCTCGTCGCGCGTGCGC CGCTGCCGGCGACGTCGCTCGCGTTCGATATCGGCACGGGCACCGGCGTGCTCGCGGCGGTGCTCGCGTCGCGCGGCGTC GAGCGTATCGTCGCGACCGACCACGATTCGCGCGCGCTCGCCTGTGCGCGCGAGAACGTCGCGCGGCTCGGTCATGCGGG CCAGGTCGAGATCGTCGAGGCCGATCTGTTTCCGGCCGGCCGGGCGCCGCTCGTGGTCTGCAATCCGCCGTGGGTGCCGG CCCGGCCGAGCGCGCCGATCGAATACGCGGTCTACGATCCCGACAGCCGCATGCTGCGCGGTTTCCTAGCCGGGCTGGCC GCGCACCTGGAGCCGGGCGGTGAAGGCTGGCTGATCCTGTCCGATTTCGCCGAGCATCTCGGCCTGCGGCCGCGCGAAAC CCTGCTGCAATGGATCGACGAAGCCGGCCTCGTCGTGCTCGGCCGCGACGACATCCGGCCCGCGCACCCGAAGTCGACGG ACGCCGACGATCCGCTGCATGCGGCGCGTCGCGCCGAGGTCACGTCGCTGTGGCGGCTCGGCGCCCGGGCCTGA
Upstream 100 bases:
>100_bases TGCGGAAACCGTCGATCTCGGCTGACGACGATTGCGCCGCGGCGAACGCTCTCGGGCGGCCGTCGCGGCGCCCGTTTTGC CGGGTCGGGCAAAGCGCGGT
Downstream 100 bases:
>100_bases CCGCGTATTTTCGGTAAACTGTCGCCATTCCTCACGAATTTCCGCCGCCGGGCCGTGGTCGACCGACCGTGGCCCGGCGG CGCTTCACGATGTCGAACAA
Product: methyltransferase small
Products: NA
Alternate protein names: Methyltransferase; Methylase Of Polypeptide Chain Release Factors; Methyltransferase Domain Protein; ElmF Protein; Methyltransferase SmallRibosomal; RNA Methyltransferase; Adenine Specific DNA-Methyltransferase; Methylase Of Polypeptide Chain Release Factors Protein; Polypeptide Chain Release Factor Methylase; Methyltransferase Small Domain-Containing Protein; 50S Ribosomal Methyltransferase PrmA Family Protein; Methylase
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRLTADAAYRLACEGTALVWQGD FQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQRARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAP SVVSLRELLGLVGAHEWRKKGVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPIEYAVYDPDSRMLRGFLAGLA AHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVLGRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA
Sequences:
>Translated_397_residues MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRLTADAAYRLACEGTALVWQGD FQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQRARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAP SVVSLRELLGLVGAHEWRKKGVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPIEYAVYDPDSRMLRGFLAGLA AHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVLGRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA >Mature_397_residues MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRLTADAAYRLACEGTALVWQGD FQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQRARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAP SVVSLRELLGLVGAHEWRKKGVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPIEYAVYDPDSRMLRGFLAGLA AHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVLGRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42913; Mature: 42913
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00092 N6_MTASE ; PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRL CCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC TADAAYRLACEGTALVWQGDFQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQ CHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH RARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAPSVVSLRELLGLVGAHEWRKK HHHHHCEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHC GVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHHCCC ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPI CEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCE EYAVYDPDSRMLRGFLAGLAAHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVL EEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHCCCEEEE GRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRL CCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC TADAAYRLACEGTALVWQGDFQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQ CHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH RARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAPSVVSLRELLGLVGAHEWRKK HHHHHCEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHC GVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHHCCC ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPI CEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCE EYAVYDPDSRMLRGFLAGLAAHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVL EEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHCCCEEEE GRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA