Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688520

Identifier: 116688520

GI number: 116688520

Start: 554549

End: 555742

Strand: Direct

Name: 116688520

Synonym: Bcen2424_0496

Alternate gene names: NA

Gene position: 554549-555742 (Clockwise)

Preceding gene: 116688519

Following gene: 116688521

Centisome position: 15.92

GC content: 72.11

Gene sequence:

>1194_bases
ATGGTGTGGTCCGCGCGGCGAATTCTCGCCGCCGCTGAAGCCAACCGTAACCGAGTTCGCGTGACCGATTCCCCCGTTTT
CCACTGGACCGACGCCGACGGCGTCGATCATGCCGTGCGCTGGCGCTCCGAAGCCGGCGTGCAACCGCCGAAGCGCGCGG
TGCCCGCCGACGACCGCCTCACCGCCGACGCGGCCTACCGTCTCGCCTGCGAGGGCACCGCGCTCGTCTGGCAGGGCGAC
TTTCAGAATGCGCGCCAGCTCGTGCAGGCGATGGCGCGCCGTGTCGAACGCAAGCCGAAGAAGGCGAAAGCCGCGGCCGG
CGTCGAAGCATTCAACCTGCATCGTCTCGCGCAATCGCAGCGCGCCCGCACGCTCGGCATGCTGCTGATCCCGCTCGACG
CCGATTACACGATCCCGCTGCGCCGTGCGCCCGACGTGCGTGCGGCCTGCGAGGAGGCGTACGGTCCCGGCGGCGCGCCG
TCGGTCGTGTCGCTGCGCGAACTGCTTGGCCTCGTCGGCGCGCACGAGTGGCGCAAGAAGGGCGTGCCGATCCCGGCGCT
CGGCGGCGCGCCGATCCATCCGCACTACGGCGTGTTTTCGCCGGTGCGCGGCGAATACGTGGAGCTCGTCGCGCGTGCGC
CGCTGCCGGCGACGTCGCTCGCGTTCGATATCGGCACGGGCACCGGCGTGCTCGCGGCGGTGCTCGCGTCGCGCGGCGTC
GAGCGTATCGTCGCGACCGACCACGATTCGCGCGCGCTCGCCTGTGCGCGCGAGAACGTCGCGCGGCTCGGTCATGCGGG
CCAGGTCGAGATCGTCGAGGCCGATCTGTTTCCGGCCGGCCGGGCGCCGCTCGTGGTCTGCAATCCGCCGTGGGTGCCGG
CCCGGCCGAGCGCGCCGATCGAATACGCGGTCTACGATCCCGACAGCCGCATGCTGCGCGGTTTCCTAGCCGGGCTGGCC
GCGCACCTGGAGCCGGGCGGTGAAGGCTGGCTGATCCTGTCCGATTTCGCCGAGCATCTCGGCCTGCGGCCGCGCGAAAC
CCTGCTGCAATGGATCGACGAAGCCGGCCTCGTCGTGCTCGGCCGCGACGACATCCGGCCCGCGCACCCGAAGTCGACGG
ACGCCGACGATCCGCTGCATGCGGCGCGTCGCGCCGAGGTCACGTCGCTGTGGCGGCTCGGCGCCCGGGCCTGA

Upstream 100 bases:

>100_bases
TGCGGAAACCGTCGATCTCGGCTGACGACGATTGCGCCGCGGCGAACGCTCTCGGGCGGCCGTCGCGGCGCCCGTTTTGC
CGGGTCGGGCAAAGCGCGGT

Downstream 100 bases:

>100_bases
CCGCGTATTTTCGGTAAACTGTCGCCATTCCTCACGAATTTCCGCCGCCGGGCCGTGGTCGACCGACCGTGGCCCGGCGG
CGCTTCACGATGTCGAACAA

Product: methyltransferase small

Products: NA

Alternate protein names: Methyltransferase; Methylase Of Polypeptide Chain Release Factors; Methyltransferase Domain Protein; ElmF Protein; Methyltransferase SmallRibosomal; RNA Methyltransferase; Adenine Specific DNA-Methyltransferase; Methylase Of Polypeptide Chain Release Factors Protein; Polypeptide Chain Release Factor Methylase; Methyltransferase Small Domain-Containing Protein; 50S Ribosomal Methyltransferase PrmA Family Protein; Methylase

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRLTADAAYRLACEGTALVWQGD
FQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQRARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAP
SVVSLRELLGLVGAHEWRKKGVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV
ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPIEYAVYDPDSRMLRGFLAGLA
AHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVLGRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA

Sequences:

>Translated_397_residues
MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRLTADAAYRLACEGTALVWQGD
FQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQRARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAP
SVVSLRELLGLVGAHEWRKKGVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV
ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPIEYAVYDPDSRMLRGFLAGLA
AHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVLGRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA
>Mature_397_residues
MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRLTADAAYRLACEGTALVWQGD
FQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQRARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAP
SVVSLRELLGLVGAHEWRKKGVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV
ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPIEYAVYDPDSRMLRGFLAGLA
AHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVLGRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA

Specific function: Unknown

COG id: COG2890

COG function: function code J; Methylase of polypeptide chain release factors

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42913; Mature: 42913

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00092 N6_MTASE ; PS00296 CHAPERONINS_CPN60

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRL
CCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
TADAAYRLACEGTALVWQGDFQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQ
CHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH
RARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAPSVVSLRELLGLVGAHEWRKK
HHHHHCEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHC
GVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHHCCC
ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPI
CEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCE
EYAVYDPDSRMLRGFLAGLAAHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVL
EEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHCCCEEEE
GRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVWSARRILAAAEANRNRVRVTDSPVFHWTDADGVDHAVRWRSEAGVQPPKRAVPADDRL
CCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
TADAAYRLACEGTALVWQGDFQNARQLVQAMARRVERKPKKAKAAAGVEAFNLHRLAQSQ
CHHHHEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH
RARTLGMLLIPLDADYTIPLRRAPDVRAACEEAYGPGGAPSVVSLRELLGLVGAHEWRKK
HHHHHCEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHC
GVPIPALGGAPIHPHYGVFSPVRGEYVELVARAPLPATSLAFDIGTGTGVLAAVLASRGV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHHCCC
ERIVATDHDSRALACARENVARLGHAGQVEIVEADLFPAGRAPLVVCNPPWVPARPSAPI
CEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCE
EYAVYDPDSRMLRGFLAGLAAHLEPGGEGWLILSDFAEHLGLRPRETLLQWIDEAGLVVL
EEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHCCCEEEE
GRDDIRPAHPKSTDADDPLHAARRAEVTSLWRLGARA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA