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The map label for this gene is ybfB [H]

Identifier: 116688524

GI number: 116688524

Start: 558252

End: 559535

Strand: Direct

Name: ybfB [H]

Synonym: Bcen2424_0500

Alternate gene names: 116688524

Gene position: 558252-559535 (Clockwise)

Preceding gene: 116688521

Following gene: 116688525

Centisome position: 16.02

GC content: 69.24

Gene sequence:

>1284_bases
ATGAACTGGGCAGTGACACGAATCAGAGGGCGCTTCCATTACGGATGGCTCGCGGCGGCGGTGGTATTCCTGATCCTGCT
GGCGGCAGCCGGCACGCGCGCGACGCCGAGCGTGCTGATGGTGCCGCTCGAACGCGAGCTCGGCTGGAGCCGCGCGGCGA
TTTCGCTGGCGATTTCGGTGAACATCGCGCTGTATGGTCTGACGGGCCCGTTCGCGGCTGCCGCGATGCAGCGCTTCGGG
CTGCGCCCGACGATCCTCACCGCGCTGGTGACGATGAGCGCGGGCGTCGCGCTGTCGTCGATGATGACGCAGAGCTGGCA
GATGGTCGTGATCTGGGGGCTGATGGTCGGCTGCTCGACGGGCGTCGTCGCGCTGACGCTGTCCGCGACCTTCGTCACGC
GCTGGTTCCATGCGCGGCGCGGCCTCGTGATGGGCATCCTGACCGCGAGCACGGCCACCGGCCAGCTCGTGTTCCTGCCG
ATGCTCGCGGCGATCGCGCAGCGCCACGGCTGGCGGCCGGTCGTGTTGGTCGTCGCGGTGGCGGCCGCGATCGTGATTCC
GCTCGTCGCGTTCCTGCTGCCCGAGCGGCCGGCCGACGTGCGGTTGCGCCCGTACGGCGAGCCGGCCGATGCGCCGCCCG
CGCCCGACGCGACCAAGGAGAACCCGCTCGCGGTCGCGTTCCGCACGCTGCTGATGGCGAGCCGCTCGCGCGATTTCTGG
CTGCTGTTCTTCAGCTTCTTCATCTGCGGCGCGAGCACCAACGGCTATGTCGGCACGCACCTGATCGCGATGTGCAGCGA
CTACGGGATGACCGAAGTGCAGGGCGCGTCGCTGCTCGCGGCGATGGGCATCTTCGACCTGTTCGGCACGACACTGTCGG
GATGGTTGTCGGACCGTTACGACAACCGCGTGCTGCTGTTCTGGTATTACGGGCTGCGCGGGCTGTCGCTGATCTATCTG
CCGCATGCGTTCGGGATCGACTTCTTCGGGCTGCCGCTGTTCGCGATGTTCTACGGGCTCGATTGGATCGCAACCGTGCC
GCCCACCGTGCGGCTCGCGACCGACGTGTTCGGCAAGGCCGCGGCGCCGGTCGTGTTCGGCTGGATCGTGGCCGGCCACC
AGCTCGGCGCGGCATTCGCGGCGCTCGGCGCGGGGCTGCTGCGCGCGAGTCTCGGCACCTATACGATCGCGTCGATGATC
TCGGGCGGGCTGTGCATCATCGGGGCGCTGATCGTGCTGCGGATCAACCGCGGCCCGTCGCGCGCGGCGGCGCAGGCAGC
CTGA

Upstream 100 bases:

>100_bases
TCGGCCCGGGTCAGCCGATGTTGAAATGCGCGGCGGAGGTGGCCTGGTCGGGGCGGGGCAGGTGCGATGGCACCGCAACC
GCCAACTGGAGAACGCGAAG

Downstream 100 bases:

>100_bases
TCGGGGCGCGTCCGACCGGCCGCCCACGCTGCGGCCGGCCATTGCACGCACGGAGATTTGCATAGCGCGGCAGGATCGGG
CGCGCCGTCGCTCAAGCGGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNWAVTRIRGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMSAGVALSSMMTQSWQMVVIWGLMVGCSTGVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLP
MLAAIAQRHGWRPVVLVVAVAAAIVIPLVAFLLPERPADVRLRPYGEPADAPPAPDATKENPLAVAFRTLLMASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGIFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIIGALIVLRINRGPSRAAAQAA

Sequences:

>Translated_427_residues
MNWAVTRIRGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMSAGVALSSMMTQSWQMVVIWGLMVGCSTGVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLP
MLAAIAQRHGWRPVVLVVAVAAAIVIPLVAFLLPERPADVRLRPYGEPADAPPAPDATKENPLAVAFRTLLMASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGIFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIIGALIVLRINRGPSRAAAQAA
>Mature_427_residues
MNWAVTRIRGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISVNIALYGLTGPFAAAAMQRFG
LRPTILTALVTMSAGVALSSMMTQSWQMVVIWGLMVGCSTGVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLP
MLAAIAQRHGWRPVVLVVAVAAAIVIPLVAFLLPERPADVRLRPYGEPADAPPAPDATKENPLAVAFRTLLMASRSRDFW
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGIFDLFGTTLSGWLSDRYDNRVLLFWYYGLRGLSLIYL
PHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKAAAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMI
SGGLCIIGALIVLRINRGPSRAAAQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI291621700, Length=420, Percent_Identity=20.4761904761905, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17550316, Length=231, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324204, Length=187, Percent_Identity=28.8770053475936, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45641; Mature: 45641

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50850 MFS ; PS00283 SOYBEAN_KUNITZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWAVTRIRGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISV
CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCEEEEEEEEE
NIALYGLTGPFAAAAMQRFGLRPTILTALVTMSAGVALSSMMTQSWQMVVIWGLMVGCST
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
GVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLPMLAAIAQRHGWRPVVLVVAV
CCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
AAAIVIPLVAFLLPERPADVRLRPYGEPADAPPAPDATKENPLAVAFRTLLMASRSRDFW
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGIFDLFGTTLSGWLSDRY
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DNRVLLFWYYGLRGLSLIYLPHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKA
CCEEEEEEEECCCCCEEEEECHHHCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCH
AAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMISGGLCIIGALIVLRINRGPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCC
RAAAQAA
CHHHCCC
>Mature Secondary Structure
MNWAVTRIRGRFHYGWLAAAVVFLILLAAAGTRATPSVLMVPLERELGWSRAAISLAISV
CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCEEEEEEEEE
NIALYGLTGPFAAAAMQRFGLRPTILTALVTMSAGVALSSMMTQSWQMVVIWGLMVGCST
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
GVVALTLSATFVTRWFHARRGLVMGILTASTATGQLVFLPMLAAIAQRHGWRPVVLVVAV
CCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
AAAIVIPLVAFLLPERPADVRLRPYGEPADAPPAPDATKENPLAVAFRTLLMASRSRDFW
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
LLFFSFFICGASTNGYVGTHLIAMCSDYGMTEVQGASLLAAMGIFDLFGTTLSGWLSDRY
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DNRVLLFWYYGLRGLSLIYLPHAFGIDFFGLPLFAMFYGLDWIATVPPTVRLATDVFGKA
CCEEEEEEEECCCCCEEEEECHHHCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCH
AAPVVFGWIVAGHQLGAAFAALGAGLLRASLGTYTIASMISGGLCIIGALIVLRINRGPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCC
RAAAQAA
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]