| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yegP [H]
Identifier: 116688519
GI number: 116688519
Start: 554141
End: 554473
Strand: Direct
Name: yegP [H]
Synonym: Bcen2424_0495
Alternate gene names: 116688519
Gene position: 554141-554473 (Clockwise)
Preceding gene: 116688518
Following gene: 116688520
Centisome position: 15.91
GC content: 61.26
Gene sequence:
>333_bases ATGGCGGCAAAATTCGAGCTCAAGAAGGCCGTGAACGGCCAGTACTACTTCCACCTGAAGTCGGCGAACGGCGAGATCAT CCTCGCGAGCGAGCGGTACGAGGAGAAAAGCGGCGCGAGGAACGGGATCGCGTCCGTGCGGGAAAATGCGCCGCTCGACG AGCGCTACGAGCGCAAGCTCGCGCACAACGGTGAACCGATGTTCAATCTGAAGGCAGCCAACCATCAGATCATCGGCACG AGCGAGACGTACAAAACCGTGCAAGGCCGCGAGAACGGCATCGCGGCCGTCAAGCGCGATGCGCCCATTGCGGAAACCGT CGATCTCGGCTGA
Upstream 100 bases:
>100_bases CAGTCTTTAATGCTTATTTCCGTGGAATCTCGATTTTGGTCGGCGCGTCCCCTTACACTTGTCGATGTCCGAGGGTCGGA CATTCTTTTAGGGGAAATCC
Downstream 100 bases:
>100_bases CGACGATTGCGCCGCGGCGAACGCTCTCGGGCGGCCGTCGCGGCGCCCGTTTTGCCGGGTCGGGCAAAGCGCGGTATGGT GTGGTCCGCGCGGCGAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAAKFELKKAVNGQYYFHLKSANGEIILASERYEEKSGARNGIASVRENAPLDERYERKLAHNGEPMFNLKAANHQIIGT SETYKTVQGRENGIAAVKRDAPIAETVDLG
Sequences:
>Translated_110_residues MAAKFELKKAVNGQYYFHLKSANGEIILASERYEEKSGARNGIASVRENAPLDERYERKLAHNGEPMFNLKAANHQIIGT SETYKTVQGRENGIAAVKRDAPIAETVDLG >Mature_109_residues AAKFELKKAVNGQYYFHLKSANGEIILASERYEEKSGARNGIASVRENAPLDERYERKLAHNGEPMFNLKAANHQIIGTS ETYKTVQGRENGIAAVKRDAPIAETVDLG
Specific function: Unknown
COG id: COG3422
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0339 family. Duplicated subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082037, Length=98, Percent_Identity=60.2040816326531, Blast_Score=121, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010879 [H]
Pfam domain/function: PF07411 DUF1508 [H]
EC number: NA
Molecular weight: Translated: 12179; Mature: 12048
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKFELKKAVNGQYYFHLKSANGEIILASERYEEKSGARNGIASVRENAPLDERYERKL CCCCCCHHHCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHHHH AHNGEPMFNLKAANHQIIGTSETYKTVQGRENGIAAVKRDAPIAETVDLG HCCCCCEEEEECCCEEEEECCHHHHCCCCCCCCEEEEECCCCCCEEECCC >Mature Secondary Structure AAKFELKKAVNGQYYFHLKSANGEIILASERYEEKSGARNGIASVRENAPLDERYERKL CCCCCHHHCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHHHH AHNGEPMFNLKAANHQIIGTSETYKTVQGRENGIAAVKRDAPIAETVDLG HCCCCCEEEEECCCEEEEECCHHHHCCCCCCCCEEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]