| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mas [H]
Identifier: 116688514
GI number: 116688514
Start: 548496
End: 549473
Strand: Reverse
Name: mas [H]
Synonym: Bcen2424_0490
Alternate gene names: 116688514
Gene position: 549473-548496 (Counterclockwise)
Preceding gene: 116688516
Following gene: 116688513
Centisome position: 15.77
GC content: 72.29
Gene sequence:
>978_bases ATGCGCAGCATCCGCTTCGACACCCCCGCCGCCGACATCGAGTCGCTCGACGCGCGCGTGCGGGACATCGCCCCGCCCGT ACCGGCCGACGGCCAGATGCTGATCGAGGTGCGCGCGGCCGGCGTGAACCCGAGCGACGTGAAGGCCGCGCTCGGCCGCA TGCCGCATGCGGTGTGGCCGCGCACGCCGGGGCGCGACTGGGCCGGCATCGTGCGCAGCGGCCCCGACAACTGGATCGGC GCGCCGGTGTGGGGCTCGGGCGGCGATCTCGGCGTCGGGCGCGACGGTTCGCATGCGGAATGGCTCGTGCTGGACGCCGC GCACGTGCGCCGCAAGCCGGGCGTGCTGACGCTCGAAGAGGCGGCCGGCGTGGGCGTGCCGTTCGTCACCGCATACGAGG GCCTGCGCCGGGCCGGCATGCCGACGGCCGACGACGTCGTGCTCGTGTTCGGCGCGAACGGCAAGGTCGGCCAGGCCGCG ATCCAGCTCGCCACCGCGCGCGGCGCGACCGTGATCGGCGTCGAGCGCGGGCCCGGCGACTATCGCGGCCATGCGTCAGG CGACGTTTCCATGATCGACGCATCGAGCCGGACGGTGGCCGACGCGGTACGCGAATTGACCGGCGGCCACGGCGCGGACA TCGTCTACAACACGGTCGGCAGCCCGTATTTCGAAGCGGCGAACGCGTCGATGGCGATCGGCGCGCGGCAGATCTTCATC TCGACGATCGAGCGCAGCGTGCCGTTCGACATCTTCGCGTTCTATCGCGGCCAGCACACGTTCGTGGGCATCGATTCGCT GCAGCTCGGCCCGGCCGCGGTCGCGCAGATCCTCGATACGCTCGCGCCCGGCTTCGGCAACGGGACGCTGCGCCCGTTCC CGATCGGCGACGACTACGTGTACCCGCTCGAGCATGCGCACGACGCGTATCGCGCGGTGCTGGCCGGTGCGCGCGAGCGC GTCATCCTCAAGCCCTGA
Upstream 100 bases:
>100_bases CCGCGTCAAACCGGGCCCACTAGACTGCATTCACCGGTTTCATCCGCCGCACGCGCCGGCCCGCCGGGCCGGGCGGCCGC CATCGTTCATGGAGATCATC
Downstream 100 bases:
>100_bases CACCGGACCTTACGGGAGACCGCCATGATGGATTACGTGACCTCGCTCGCGGTGGGCGTCGGTGTCGGTGTGTTGTACGC GCTGCTGCACGTGCGCTCGC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRSIRFDTPAADIESLDARVRDIAPPVPADGQMLIEVRAAGVNPSDVKAALGRMPHAVWPRTPGRDWAGIVRSGPDNWIG APVWGSGGDLGVGRDGSHAEWLVLDAAHVRRKPGVLTLEEAAGVGVPFVTAYEGLRRAGMPTADDVVLVFGANGKVGQAA IQLATARGATVIGVERGPGDYRGHASGDVSMIDASSRTVADAVRELTGGHGADIVYNTVGSPYFEAANASMAIGARQIFI STIERSVPFDIFAFYRGQHTFVGIDSLQLGPAAVAQILDTLAPGFGNGTLRPFPIGDDYVYPLEHAHDAYRAVLAGARER VILKP
Sequences:
>Translated_325_residues MRSIRFDTPAADIESLDARVRDIAPPVPADGQMLIEVRAAGVNPSDVKAALGRMPHAVWPRTPGRDWAGIVRSGPDNWIG APVWGSGGDLGVGRDGSHAEWLVLDAAHVRRKPGVLTLEEAAGVGVPFVTAYEGLRRAGMPTADDVVLVFGANGKVGQAA IQLATARGATVIGVERGPGDYRGHASGDVSMIDASSRTVADAVRELTGGHGADIVYNTVGSPYFEAANASMAIGARQIFI STIERSVPFDIFAFYRGQHTFVGIDSLQLGPAAVAQILDTLAPGFGNGTLRPFPIGDDYVYPLEHAHDAYRAVLAGARER VILKP >Mature_325_residues MRSIRFDTPAADIESLDARVRDIAPPVPADGQMLIEVRAAGVNPSDVKAALGRMPHAVWPRTPGRDWAGIVRSGPDNWIG APVWGSGGDLGVGRDGSHAEWLVLDAAHVRRKPGVLTLEEAAGVGVPFVTAYEGLRRAGMPTADDVVLVFGANGKVGQAA IQLATARGATVIGVERGPGDYRGHASGDVSMIDASSRTVADAVRELTGGHGADIVYNTVGSPYFEAANASMAIGARQIFI STIERSVPFDIFAFYRGQHTFVGIDSLQLGPAAVAQILDTLAPGFGNGTLRPFPIGDDYVYPLEHAHDAYRAVLAGARER VILKP
Specific function: Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids [H]
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=338, Percent_Identity=28.698224852071, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI13236495, Length=338, Percent_Identity=28.698224852071, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI194239676, Length=331, Percent_Identity=28.7009063444109, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI22538446, Length=327, Percent_Identity=24.1590214067278, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI22538444, Length=327, Percent_Identity=24.1590214067278, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17507255, Length=177, Percent_Identity=33.8983050847458, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR013968 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00107 ADH_zinc_N; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: =2.3.1.111 [H]
Molecular weight: Translated: 34220; Mature: 34220
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIRFDTPAADIESLDARVRDIAPPVPADGQMLIEVRAAGVNPSDVKAALGRMPHAVWP CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCC RTPGRDWAGIVRSGPDNWIGAPVWGSGGDLGVGRDGSHAEWLVLDAAHVRRKPGVLTLEE CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCEEEEHH AAGVGVPFVTAYEGLRRAGMPTADDVVLVFGANGKVGQAAIQLATARGATVIGVERGPGD HCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHEEEEECCCCEEEEEECCCCC YRGHASGDVSMIDASSRTVADAVRELTGGHGADIVYNTVGSPYFEAANASMAIGARQIFI CCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCEEEHHHHHHHH STIERSVPFDIFAFYRGQHTFVGIDSLQLGPAAVAQILDTLAPGFGNGTLRPFPIGDDYV HHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC YPLEHAHDAYRAVLAGARERVILKP CCHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MRSIRFDTPAADIESLDARVRDIAPPVPADGQMLIEVRAAGVNPSDVKAALGRMPHAVWP CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCC RTPGRDWAGIVRSGPDNWIGAPVWGSGGDLGVGRDGSHAEWLVLDAAHVRRKPGVLTLEE CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCEEEEHH AAGVGVPFVTAYEGLRRAGMPTADDVVLVFGANGKVGQAAIQLATARGATVIGVERGPGD HCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHEEEEECCCCEEEEEECCCCC YRGHASGDVSMIDASSRTVADAVRELTGGHGADIVYNTVGSPYFEAANASMAIGARQIFI CCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCEEEHHHHHHHH STIERSVPFDIFAFYRGQHTFVGIDSLQLGPAAVAQILDTLAPGFGNGTLRPFPIGDDYV HHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC YPLEHAHDAYRAVLAGARERVILKP CCHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1527058; 12788972 [H]