| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688513
Identifier: 116688513
GI number: 116688513
Start: 548319
End: 548471
Strand: Reverse
Name: 116688513
Synonym: Bcen2424_0489
Alternate gene names: NA
Gene position: 548471-548319 (Counterclockwise)
Preceding gene: 116688514
Following gene: 116688510
Centisome position: 15.74
GC content: 68.63
Gene sequence:
>153_bases ATGATGGATTACGTGACCTCGCTCGCGGTGGGCGTCGGTGTCGGTGTGTTGTACGCGCTGCTGCACGTGCGCTCGCCGGC CCCGCCGCTCGTTGCGCTCGTCGGCCTGCTCGGGATGGTGATCGGCGAACGCGCGATCGCGCTGCTGCGTTGA
Upstream 100 bases:
>100_bases CCCGCTCGAGCATGCGCACGACGCGTATCGCGCGGTGCTGGCCGGTGCGCGCGAGCGCGTCATCCTCAAGCCCTGACACC GGACCTTACGGGAGACCGCC
Downstream 100 bases:
>100_bases TGCGCTGCTGCGTTGATGCGTTGATGCGTCGCCCGATGGCGCGCTAGCGATCGTCGCGGCGCCGGAACGCCCACCACGCG GCCAGCGCGGTGAAGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MMDYVTSLAVGVGVGVLYALLHVRSPAPPLVALVGLLGMVIGERAIALLR
Sequences:
>Translated_50_residues MMDYVTSLAVGVGVGVLYALLHVRSPAPPLVALVGLLGMVIGERAIALLR >Mature_50_residues MMDYVTSLAVGVGVGVLYALLHVRSPAPPLVALVGLLGMVIGERAIALLR
Specific function: Unknown
COG id: COG4317
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5173; Mature: 5173
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDYVTSLAVGVGVGVLYALLHVRSPAPPLVALVGLLGMVIGERAIALLR CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMDYVTSLAVGVGVGVLYALLHVRSPAPPLVALVGLLGMVIGERAIALLR CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA