Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688336

Identifier: 116688336

GI number: 116688336

Start: 352944

End: 354185

Strand: Reverse

Name: 116688336

Synonym: Bcen2424_0312

Alternate gene names: NA

Gene position: 354185-352944 (Counterclockwise)

Preceding gene: 116688337

Following gene: 116688335

Centisome position: 10.17

GC content: 66.91

Gene sequence:

>1242_bases
ATGAAGCGCAACCTCATTCTGGCGGCGGCCCTTGCCGCCCCCCTTCTTTCCGCTTGCGGCGGCGGCAGCGACAATCCGCC
CCCGCTCGTCGAAGACCGGCTGTGCCCCGCCACGCTCGACTACAACACCGTGTTTACGGGCGGCGCGGGCAGCGGCGAAC
TCGCGAAGGTCCAGCTCGACACGACCAAGATGACCTGGCAGGTGACCTATGTCGAATCGGCGGTGCCGCAAAAGACCGGC
ACCGTCACGCCGACCCGCGCGGGCACCGTCGACAGCGGCACGCTCACGCAGGAAACGCTGCTGCCGACCAACAAGCTGAA
CCAGTGCGCATTCCGCCTGAACGGCGCGAGCCTCGATGCGTCGCGCCCGGCGCGCATCTTCGTCGGCTTCGGCGTTGCCG
GCGGCACGATTCCCGGCAAGGAGATCCAGTTCGACGGCGTGCTCGGCCAGGCCGCGGTGCCCGACACAAAATTCCCGTAC
TACCCGTTCATCGGCTTCTCGTCGATCGAAACCGACATCACGAAGGTCGCGGGCACGTACAGCCACATCGGCTTCGGCGA
AGTACCGTCGCAGAAATTCGGGCCGGCGTCGATCGACGCGAAGGTGACGATCAACGCGGACGGCACCTGGACCAAGTGCG
ACACGACCGGCCAGTTCGCCGGCGGCGCGTGCGCGCAGCAGGGCACGAATTTCGTGCAGTCGGCCGACGGCAGCGGCGCG
TTCCAGTCGAACAACTACGCGAGCCAGTTGAAGCCGACGCTGTCGGCCACGCCGCAGGGCAAGGGCTTCATGATCGTCGG
CAAGCTGCGTAACCAGCTCGTGCCGATCCTCGTGCGCACGGGGGTCGCGAACCCGAACCCGACGCCGGACAGCAACGGCG
TGCCGGGCCTGACCGCCGACGACGAATCGAGCATCTCGATCCTCGCGCCGCAGACGGCCGTCGCGGCCGGCTCGCAGAAC
GGCGAGTACATCGGCGTCGACAGCCAGTTCGATTACCGGACCACCGCGCTGATCGACAAGCAGGCCACGCTGCTCGATCC
GTTCCAGCCGTCGCAGGCGTCGCTCGCGACCGCGCTCGACCTCGACTACACGCAGAAGGTGCCGGGCACGGTCACGACGA
TCCACACGGGTTCGGGCAGCACGTCGCCGACCGGCAAGTTCATCTTCTCGGGTGGCGTGTTCGGTTTCCTCGACAACGCC
GGATCGACGCCGTATTTCACGATCGGCGCATTCGTCCAGTAA

Upstream 100 bases:

>100_bases
CACGAAGGCGCTCGGCACGGCGCAGGCAGGACGAGTACGACCAACAGAAGCGGCCGACAGGGAGCTGGCCGCCGCACAAA
GACAAATCTGGAGGAGCAAC

Downstream 100 bases:

>100_bases
GCGGAGGGGAAAGCCGTGATGAAGAAAACCCTTCTCTGCGCGGCGGCCGGCGCCGCCGCCGTGGCGCCGCTCGCGGCGCA
CGCGCAGAGCGCCGGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKRNLILAAALAAPLLSACGGGSDNPPPLVEDRLCPATLDYNTVFTGGAGSGELAKVQLDTTKMTWQVTYVESAVPQKTG
TVTPTRAGTVDSGTLTQETLLPTNKLNQCAFRLNGASLDASRPARIFVGFGVAGGTIPGKEIQFDGVLGQAAVPDTKFPY
YPFIGFSSIETDITKVAGTYSHIGFGEVPSQKFGPASIDAKVTINADGTWTKCDTTGQFAGGACAQQGTNFVQSADGSGA
FQSNNYASQLKPTLSATPQGKGFMIVGKLRNQLVPILVRTGVANPNPTPDSNGVPGLTADDESSISILAPQTAVAAGSQN
GEYIGVDSQFDYRTTALIDKQATLLDPFQPSQASLATALDLDYTQKVPGTVTTIHTGSGSTSPTGKFIFSGGVFGFLDNA
GSTPYFTIGAFVQ

Sequences:

>Translated_413_residues
MKRNLILAAALAAPLLSACGGGSDNPPPLVEDRLCPATLDYNTVFTGGAGSGELAKVQLDTTKMTWQVTYVESAVPQKTG
TVTPTRAGTVDSGTLTQETLLPTNKLNQCAFRLNGASLDASRPARIFVGFGVAGGTIPGKEIQFDGVLGQAAVPDTKFPY
YPFIGFSSIETDITKVAGTYSHIGFGEVPSQKFGPASIDAKVTINADGTWTKCDTTGQFAGGACAQQGTNFVQSADGSGA
FQSNNYASQLKPTLSATPQGKGFMIVGKLRNQLVPILVRTGVANPNPTPDSNGVPGLTADDESSISILAPQTAVAAGSQN
GEYIGVDSQFDYRTTALIDKQATLLDPFQPSQASLATALDLDYTQKVPGTVTTIHTGSGSTSPTGKFIFSGGVFGFLDNA
GSTPYFTIGAFVQ
>Mature_413_residues
MKRNLILAAALAAPLLSACGGGSDNPPPLVEDRLCPATLDYNTVFTGGAGSGELAKVQLDTTKMTWQVTYVESAVPQKTG
TVTPTRAGTVDSGTLTQETLLPTNKLNQCAFRLNGASLDASRPARIFVGFGVAGGTIPGKEIQFDGVLGQAAVPDTKFPY
YPFIGFSSIETDITKVAGTYSHIGFGEVPSQKFGPASIDAKVTINADGTWTKCDTTGQFAGGACAQQGTNFVQSADGSGA
FQSNNYASQLKPTLSATPQGKGFMIVGKLRNQLVPILVRTGVANPNPTPDSNGVPGLTADDESSISILAPQTAVAAGSQN
GEYIGVDSQFDYRTTALIDKQATLLDPFQPSQASLATALDLDYTQKVPGTVTTIHTGSGSTSPTGKFIFSGGVFGFLDNA
GSTPYFTIGAFVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42779; Mature: 42779

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNLILAAALAAPLLSACGGGSDNPPPLVEDRLCPATLDYNTVFTGGAGSGELAKVQLD
CCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCEEEEEEE
TTKMTWQVTYVESAVPQKTGTVTPTRAGTVDSGTLTQETLLPTNKLNQCAFRLNGASLDA
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCC
SRPARIFVGFGVAGGTIPGKEIQFDGVLGQAAVPDTKFPYYPFIGFSSIETDITKVAGTY
CCCEEEEEEECCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH
SHIGFGEVPSQKFGPASIDAKVTINADGTWTKCDTTGQFAGGACAQQGTNFVQSADGSGA
HCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHCCHHHHCCCCCCC
FQSNNYASQLKPTLSATPQGKGFMIVGKLRNQLVPILVRTGVANPNPTPDSNGVPGLTAD
CCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
DESSISILAPQTAVAAGSQNGEYIGVDSQFDYRTTALIDKQATLLDPFQPSQASLATALD
CCCCEEEECCCHHEECCCCCCCEEEECCCCCCEEEEEECCCHHCCCCCCCCHHHEEEEEC
LDYTQKVPGTVTTIHTGSGSTSPTGKFIFSGGVFGFLDNAGSTPYFTIGAFVQ
CCCCCCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MKRNLILAAALAAPLLSACGGGSDNPPPLVEDRLCPATLDYNTVFTGGAGSGELAKVQLD
CCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCEEEEEEE
TTKMTWQVTYVESAVPQKTGTVTPTRAGTVDSGTLTQETLLPTNKLNQCAFRLNGASLDA
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCC
SRPARIFVGFGVAGGTIPGKEIQFDGVLGQAAVPDTKFPYYPFIGFSSIETDITKVAGTY
CCCEEEEEEECCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH
SHIGFGEVPSQKFGPASIDAKVTINADGTWTKCDTTGQFAGGACAQQGTNFVQSADGSGA
HCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHCCHHHHCCCCCCC
FQSNNYASQLKPTLSATPQGKGFMIVGKLRNQLVPILVRTGVANPNPTPDSNGVPGLTAD
CCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
DESSISILAPQTAVAAGSQNGEYIGVDSQFDYRTTALIDKQATLLDPFQPSQASLATALD
CCCCEEEECCCHHEECCCCCCCEEEECCCCCCEEEEEECCCHHCCCCCCCCHHHEEEEEC
LDYTQKVPGTVTTIHTGSGSTSPTGKFIFSGGVFGFLDNAGSTPYFTIGAFVQ
CCCCCCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA