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The map label for this gene is ompW [H]

Identifier: 116688335

GI number: 116688335

Start: 352092

End: 352925

Strand: Reverse

Name: ompW [H]

Synonym: Bcen2424_0311

Alternate gene names: 116688335

Gene position: 352925-352092 (Counterclockwise)

Preceding gene: 116688336

Following gene: 116688333

Centisome position: 10.13

GC content: 68.11

Gene sequence:

>834_bases
ATGAAGAAAACCCTTCTCTGCGCGGCGGCCGGCGCCGCCGCCGTGGCGCCGCTCGCGGCGCACGCGCAGAGCGCCGGCAG
CAACGTCGTCACGCTGGGCTGGTTCCACATCATGCCGCTGCAGAGCAGCACGCCGATGAGGACCAACGTCGCGCCGACGC
CGATCAACACGCCGCTGCGGCTGCCGCCGTCGTTCACGTCGGCGGGCACCGGGCTGCACACGAGCGGCGCCGACACCGTC
GGCCTGACGGTCAGCCACTTCCTGACCGACCATATCGCGGTGACGTCGGTGGCCGGCGTGCCGCCGGTGTTCAAGGTGTC
GGGCCAAGGCACGATCAAGCCGCCGGGCCCGGCCGGCGCGCTCGGCACGCAGAACATCGGGCTGGGGTCGGTCAACCCGA
TCGTGAAGAGCGTGCGGCAGTGGAGCCCGGCGGTGATCCTGCAGTACTACTTCGGGCAGGCCACCGCGAAGTTCCGGCCG
TTCCTCGGCCTCGGCGTGTCGTACAACTGGTTCAGCGACCTGCAGCTCAACACGAACTTCATCAAGCAGACGCAGGACAA
CCTCGGCGCGATCCTCGCGGCGGGCGCGGGCAAGCCGGGGACGACCTCGGTGGAAGCGAAGGCGTCGTCGTCGTGGCAGC
CGGTGTTCAACGCGGGCCTGCAGTACAACCTGACGGAACACTTCGGGCTGGTCGCATCGGTGACCTACATCCCGCTGAAG
ACGACGTCGACGGTGACGATCAAGGCGGCGGACGGCTCGGTGCTCGCCGAGTCGAAATCGGACCTGAAGGCGGACCCGAT
CATCAGCTACGTCGGGATGACGTACAAGTTCTGA

Upstream 100 bases:

>100_bases
CATCTTCTCGGGTGGCGTGTTCGGTTTCCTCGACAACGCCGGATCGACGCCGTATTTCACGATCGGCGCATTCGTCCAGT
AAGCGGAGGGGAAAGCCGTG

Downstream 100 bases:

>100_bases
GCGCGGCGAGAAGCCGGCGAATGGATGGCCGCGACAAAATCGCAGGCAAAAAAAAGCCCGCCTAAGTGGCGGGCTGAATC
CATATCAGAGGAGACATGGA

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKTLLCAAAGAAAVAPLAAHAQSAGSNVVTLGWFHIMPLQSSTPMRTNVAPTPINTPLRLPPSFTSAGTGLHTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGALGTQNIGLGSVNPIVKSVRQWSPAVILQYYFGQATAKFRP
FLGLGVSYNWFSDLQLNTNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNLTEHFGLVASVTYIPLK
TTSTVTIKAADGSVLAESKSDLKADPIISYVGMTYKF

Sequences:

>Translated_277_residues
MKKTLLCAAAGAAAVAPLAAHAQSAGSNVVTLGWFHIMPLQSSTPMRTNVAPTPINTPLRLPPSFTSAGTGLHTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGALGTQNIGLGSVNPIVKSVRQWSPAVILQYYFGQATAKFRP
FLGLGVSYNWFSDLQLNTNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNLTEHFGLVASVTYIPLK
TTSTVTIKAADGSVLAESKSDLKADPIISYVGMTYKF
>Mature_277_residues
MKKTLLCAAAGAAAVAPLAAHAQSAGSNVVTLGWFHIMPLQSSTPMRTNVAPTPINTPLRLPPSFTSAGTGLHTSGADTV
GLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGALGTQNIGLGSVNPIVKSVRQWSPAVILQYYFGQATAKFRP
FLGLGVSYNWFSDLQLNTNFIKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNLTEHFGLVASVTYIPLK
TTSTVTIKAADGSVLAESKSDLKADPIISYVGMTYKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 28785; Mature: 28785

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLCAAAGAAAVAPLAAHAQSAGSNVVTLGWFHIMPLQSSTPMRTNVAPTPINTPLR
CCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
LPPSFTSAGTGLHTSGADTVGLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
LGTQNIGLGSVNPIVKSVRQWSPAVILQYYFGQATAKFRPFLGLGVSYNWFSDLQLNTNF
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEECCCCCCCCCCEEECHHH
IKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNLTEHFGLVASVTYIPLK
HHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCHHHHCCEEEECHHHHCEEEEEEEEEEE
TTSTVTIKAADGSVLAESKSDLKADPIISYVGMTYKF
CCCEEEEEECCCCEEECCCCCCCCCCHHHCCCCEECC
>Mature Secondary Structure
MKKTLLCAAAGAAAVAPLAAHAQSAGSNVVTLGWFHIMPLQSSTPMRTNVAPTPINTPLR
CCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
LPPSFTSAGTGLHTSGADTVGLTVSHFLTDHIAVTSVAGVPPVFKVSGQGTIKPPGPAGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
LGTQNIGLGSVNPIVKSVRQWSPAVILQYYFGQATAKFRPFLGLGVSYNWFSDLQLNTNF
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEECCCCCCCCCCEEECHHH
IKQTQDNLGAILAAGAGKPGTTSVEAKASSSWQPVFNAGLQYNLTEHFGLVASVTYIPLK
HHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCHHHHCCEEEECHHHHCEEEEEEEEEEE
TTSTVTIKAADGSVLAESKSDLKADPIISYVGMTYKF
CCCEEEEEECCCCEEECCCCCCCCCCHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]