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The map label for this gene is ydeR [H]

Identifier: 116688333

GI number: 116688333

Start: 349596

End: 350879

Strand: Reverse

Name: ydeR [H]

Synonym: Bcen2424_0309

Alternate gene names: 116688333

Gene position: 350879-349596 (Counterclockwise)

Preceding gene: 116688335

Following gene: 116688330

Centisome position: 10.07

GC content: 75.47

Gene sequence:

>1284_bases
ATGAACTGCCCTGCCGACCGTTGCTCCGCCCCCGTTTCGCCCGCCGTCGCCGCGCCGCCCGCACTGAGCACGGGCATGAC
GCTGTTCTTCGCCGCGACGGTCGGCGTGATCGTGATGGACCTGTTCGCCGCGCAGCCGCTGACCGGTCCGATCAGCGCGG
ACCTGCACCTGCCGCCCGGCCTCGCCGGCCTCGTCGCGATGCTGCCGCAGCTCGGCTACGCGGCCGGGCTCGCGTTGCTC
GTGCCGCTGGTCGACCTGCTCGAGAACCGGCGCCTGATCGTCGCGACGCTCGCCGTCTGCGCGGCGGCGCTCGCGCTGCC
CGCCTTCACGCAGTCGGGCGCCGTGTTCCTGCTTGCAACGCTCGCGGCCGGCGCCGCGTCGAGCGTGATCCAGATGCTGG
TGCCGATGGCCGCGTCGATGGCACCCGAAGCGCAGCGCGGCCGCGCGGTCGGCAACGTGATGAGCGGGCTGATGCTCGGC
ATCCTGCTGTCGCGGCCGCTCGCGAGCCTGATCGCGGGCTCGGCCGGCTGGCGGGCGTTCTATCTGCTGGCTGCGCTCGC
GGACGCGGCGATCGCCGTCGTGCTCGCGCTGCGCCTGCCGGCGCGCACGCCGTCGATCACCGCTAGCTACCGCGCGTTGC
TCGCGTCGATGGGACGCCTGCTTGCCGACGAGCCGGTGCTGCGCCGGCATGCGCTGTCGGCCGCGCTCGCGATGGCCGCG
TTCAGCGCGTTCTGGACCGCCGTCGGGCTGCGGCTCGCGCAGCCGCCGTTCGCGCTCGACCTGCACGGCATTGCGCTGTT
CGCGTTCGCCGGCGCGAGCGGCGCGATCGTCACGCCGCTCGCCGGCCGCGCGGGCGACCGCGGCCACGGCCCGGCCGCGC
AACGGCTCGCGCACGGCACGATGCTCGCGGCGCTCGTCGTGCTCGGCGTCGCCGGCGCCGGCTGGTTCGGTTTCGATGCG
CATGCGCATCGCGGCGTCGCGCTCGCGCTGCTGGCCGGCGGCGCGGCGCTGCTCGATGCGGGCGTCATCGTCGACCAGAC
GATCGGCCGCCGCGCGATCAACCTGCTGCACCCGGCCGCGCGCGGACGCCTGAACGGGCTGTTCGTCGGACTGTTCTTCG
TCGGCGGCGCGCTGGGTGCGGCGCTCGCGGGCAGTGCATGGGCATGGGGCGGCTGGAGCGCGGTGTGTGGTGTCGGCTTC
GCGTTCGCCGGTGCGGCGGCCGCGTTCGGGCTGATGGCCGGACGCGGGGCCGGCGCGGCGGCGTGGGATCGGCCGGGTGC
GTGA

Upstream 100 bases:

>100_bases
CAAAACAAACTCGCATAATCATGTTAGACATATTTCAATTGTCGCATAAACATCGGACACCTACGATGGGAGTTCCTTCG
ATTTCCACCCCAGGCTTCCG

Downstream 100 bases:

>100_bases
GCAAACATGAGCGGGCATGAGCGCGCGTGATGCCAGCGGCGGTGAAGCGACGATGAAGCGGCGCCAAAAAGCCGAACGCC
CCACCCTCTCGCGAGGGACG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNCPADRCSAPVSPAVAAPPALSTGMTLFFAATVGVIVMDLFAAQPLTGPISADLHLPPGLAGLVAMLPQLGYAAGLALL
VPLVDLLENRRLIVATLAVCAAALALPAFTQSGAVFLLATLAAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLG
ILLSRPLASLIAGSAGWRAFYLLAALADAAIAVVLALRLPARTPSITASYRALLASMGRLLADEPVLRRHALSAALAMAA
FSAFWTAVGLRLAQPPFALDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPAAQRLAHGTMLAALVVLGVAGAGWFGFDA
HAHRGVALALLAGGAALLDAGVIVDQTIGRRAINLLHPAARGRLNGLFVGLFFVGGALGAALAGSAWAWGGWSAVCGVGF
AFAGAAAAFGLMAGRGAGAAAWDRPGA

Sequences:

>Translated_427_residues
MNCPADRCSAPVSPAVAAPPALSTGMTLFFAATVGVIVMDLFAAQPLTGPISADLHLPPGLAGLVAMLPQLGYAAGLALL
VPLVDLLENRRLIVATLAVCAAALALPAFTQSGAVFLLATLAAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLG
ILLSRPLASLIAGSAGWRAFYLLAALADAAIAVVLALRLPARTPSITASYRALLASMGRLLADEPVLRRHALSAALAMAA
FSAFWTAVGLRLAQPPFALDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPAAQRLAHGTMLAALVVLGVAGAGWFGFDA
HAHRGVALALLAGGAALLDAGVIVDQTIGRRAINLLHPAARGRLNGLFVGLFFVGGALGAALAGSAWAWGGWSAVCGVGF
AFAGAAAAFGLMAGRGAGAAAWDRPGA
>Mature_427_residues
MNCPADRCSAPVSPAVAAPPALSTGMTLFFAATVGVIVMDLFAAQPLTGPISADLHLPPGLAGLVAMLPQLGYAAGLALL
VPLVDLLENRRLIVATLAVCAAALALPAFTQSGAVFLLATLAAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLG
ILLSRPLASLIAGSAGWRAFYLLAALADAAIAVVLALRLPARTPSITASYRALLASMGRLLADEPVLRRHALSAALAMAA
FSAFWTAVGLRLAQPPFALDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPAAQRLAHGTMLAALVVLGVAGAGWFGFDA
HAHRGVALALLAGGAALLDAGVIVDQTIGRRAINLLHPAARGRLNGLFVGLFFVGGALGAALAGSAWAWGGWSAVCGVGF
AFAGAAAAFGLMAGRGAGAAAWDRPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42538; Mature: 42538

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: PS00136 SUBTILASE_ASP ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCPADRCSAPVSPAVAAPPALSTGMTLFFAATVGVIVMDLFAAQPLTGPISADLHLPPG
CCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LAGLVAMLPQLGYAAGLALLVPLVDLLENRRLIVATLAVCAAALALPAFTQSGAVFLLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLGILLSRPLASLIAGSAGWRAF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YLLAALADAAIAVVLALRLPARTPSITASYRALLASMGRLLADEPVLRRHALSAALAMAA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FSAFWTAVGLRLAQPPFALDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPAAQRLAHGT
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHH
MLAALVVLGVAGAGWFGFDAHAHRGVALALLAGGAALLDAGVIVDQTIGRRAINLLHPAA
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH
RGRLNGLFVGLFFVGGALGAALAGSAWAWGGWSAVCGVGFAFAGAAAAFGLMAGRGAGAA
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWDRPGA
CCCCCCC
>Mature Secondary Structure
MNCPADRCSAPVSPAVAAPPALSTGMTLFFAATVGVIVMDLFAAQPLTGPISADLHLPPG
CCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LAGLVAMLPQLGYAAGLALLVPLVDLLENRRLIVATLAVCAAALALPAFTQSGAVFLLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAAGAASSVIQMLVPMAASMAPEAQRGRAVGNVMSGLMLGILLSRPLASLIAGSAGWRAF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YLLAALADAAIAVVLALRLPARTPSITASYRALLASMGRLLADEPVLRRHALSAALAMAA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FSAFWTAVGLRLAQPPFALDLHGIALFAFAGASGAIVTPLAGRAGDRGHGPAAQRLAHGT
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHH
MLAALVVLGVAGAGWFGFDAHAHRGVALALLAGGAALLDAGVIVDQTIGRRAINLLHPAA
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH
RGRLNGLFVGLFFVGGALGAALAGSAWAWGGWSAVCGVGFAFAGAAAAFGLMAGRGAGAA
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWDRPGA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]