| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688323
Identifier: 116688323
GI number: 116688323
Start: 340079
End: 340711
Strand: Direct
Name: 116688323
Synonym: Bcen2424_0299
Alternate gene names: NA
Gene position: 340079-340711 (Clockwise)
Preceding gene: 116688322
Following gene: 116688324
Centisome position: 9.76
GC content: 75.51
Gene sequence:
>633_bases ATGACAACCTCCACACTTCTTCCCTCGTACACGGCCTTCGACGGCCACCGGCGGCTCGCGTCGGGCCCGCTCGCGACGGT CGCGCTCGCGGTCCGGCAGGCGGCCGGCGACGCGATGCCCGGTTCGATCCTGATCTTCGACGACGCGACGGGCCGCTCGA TCGACCTCGATCTGCGCGGCACGGCGGACGACATCCGCGCGCGCTATGCGCCGCCGTCGGCCGACGCGTCCGGCGGCGCC GGCGAGCCGGCAGGCGCTGGCGCTGCCGAACAGCGCGGCCGCGGCCGGCCGAAGCTCGGCGTCGTGTCGCGCGAGGTCAC GCTGCTGCCGCGTCACTGGGAATGGCTCGGCGCGCAGCCGGGCGGCGCGTCGGTCGCGCTGCGCAAGCTCGTCGAGGACG CGCGGCGCACGCACGCGGCGGCCGACCGGCAGCGCGACGCGCAGGCGCGTGCGTACCACTTCATGTCGGCGATGGCGGGC GACCTGCCCGGTTTCGAGGAAGCCGCGCGGGCGCTGTATGCGAACGATCCGGCGCGGCTGGCCGAGCTGATCGCCGGCTG GCCCGACGACGTGCGCGACCATGCGCTTGCCCTGGCGCGCGGCGATCTGCCGCCGGTCGCCGAAGACTGCTGA
Upstream 100 bases:
>100_bases GGAACATGCTGGCGACAATTTTTACCCGGATAATATTGACATCCAATTAATACCCGGATAAAAATAGCGTCATTCCGATT CCAGCCTGCGGGCGACCACG
Downstream 100 bases:
>100_bases CGGAGCGCCGACGCGATGACCGTATTCGACCTCAACCGCGGCGCGCTCGCGCCGGTCGCCGACGAAGTCGACATCGTCGA GCTGCGCGTGACGGGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTTSTLLPSYTAFDGHRRLASGPLATVALAVRQAAGDAMPGSILIFDDATGRSIDLDLRGTADDIRARYAPPSADASGGA GEPAGAGAAEQRGRGRPKLGVVSREVTLLPRHWEWLGAQPGGASVALRKLVEDARRTHAAADRQRDAQARAYHFMSAMAG DLPGFEEAARALYANDPARLAELIAGWPDDVRDHALALARGDLPPVAEDC
Sequences:
>Translated_210_residues MTTSTLLPSYTAFDGHRRLASGPLATVALAVRQAAGDAMPGSILIFDDATGRSIDLDLRGTADDIRARYAPPSADASGGA GEPAGAGAAEQRGRGRPKLGVVSREVTLLPRHWEWLGAQPGGASVALRKLVEDARRTHAAADRQRDAQARAYHFMSAMAG DLPGFEEAARALYANDPARLAELIAGWPDDVRDHALALARGDLPPVAEDC >Mature_209_residues TTSTLLPSYTAFDGHRRLASGPLATVALAVRQAAGDAMPGSILIFDDATGRSIDLDLRGTADDIRARYAPPSADASGGAG EPAGAGAAEQRGRGRPKLGVVSREVTLLPRHWEWLGAQPGGASVALRKLVEDARRTHAAADRQRDAQARAYHFMSAMAGD LPGFEEAARALYANDPARLAELIAGWPDDVRDHALALARGDLPPVAEDC
Specific function: Unknown
COG id: COG3644
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22086; Mature: 21955
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTLLPSYTAFDGHRRLASGPLATVALAVRQAAGDAMPGSILIFDDATGRSIDLDLRG CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECC TADDIRARYAPPSADASGGAGEPAGAGAAEQRGRGRPKLGVVSREVTLLPRHWEWLGAQP CHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCEEEECCCHHHHHCCCC GGASVALRKLVEDARRTHAAADRQRDAQARAYHFMSAMAGDLPGFEEAARALYANDPARL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH AELIAGWPDDVRDHALALARGDLPPVAEDC HHHHHCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TTSTLLPSYTAFDGHRRLASGPLATVALAVRQAAGDAMPGSILIFDDATGRSIDLDLRG CCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECC TADDIRARYAPPSADASGGAGEPAGAGAAEQRGRGRPKLGVVSREVTLLPRHWEWLGAQP CHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCEEEECCCHHHHHCCCC GGASVALRKLVEDARRTHAAADRQRDAQARAYHFMSAMAGDLPGFEEAARALYANDPARL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH AELIAGWPDDVRDHALALARGDLPPVAEDC HHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA