Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688139

Identifier: 116688139

GI number: 116688139

Start: 123306

End: 123716

Strand: Reverse

Name: 116688139

Synonym: Bcen2424_0115

Alternate gene names: NA

Gene position: 123716-123306 (Counterclockwise)

Preceding gene: 116688140

Following gene: 116688134

Centisome position: 3.55

GC content: 51.34

Gene sequence:

>411_bases
ATGCCTAAATTTATTGTTAGCCTATACCTGATCACATCTAGTCCGGTATTCGCATGCATCGCCAGCGAGAACTTCGACAT
CTACTTTTCGAGAGATAGCTCGCACATCTCGAACGCCGAAATCGTCCGCATTGCAAAATGGACAATCGACCAGAAACTCA
ATTACGCGAATCACCTGACCAAGGAAACAACGCTGATCAGCGGCCATGCCGAGGAAAGTGAACCGGAAGCACTGGCCCTT
GCGCAATCAAGATTGCAAACCGCGTATGCGCTGTTGGAGCAACTCGGTTTTTTACGCGGCACCATCAAGAAGAGCGTCCG
CGTCTATTCGCATGGCGACGTCGACAATGGGCGGCGTGTGGAAATTTCCTTCCTGCCCGATTGCCCTAACAAGTGCTGCG
ACGGCAAGTAA

Upstream 100 bases:

>100_bases
TCTCGGGGCAGGACATTCCGTTTACCGAGACACGGCCGTGGTTGAGCAACGTCGACCAGCAATCAACAATGCCGACAGCA
TTGCAGGACACGTAATTTAC

Downstream 100 bases:

>100_bases
CGTCATACTGCCGCCGATCGGGGCGATGCGGTATCGACGTACACATGCGGCGAACCTGCTGCACCACTGCCTGCAACATC
CCTATGCCCCTGTCGGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MPKFIVSLYLITSSPVFACIASENFDIYFSRDSSHISNAEIVRIAKWTIDQKLNYANHLTKETTLISGHAEESEPEALAL
AQSRLQTAYALLEQLGFLRGTIKKSVRVYSHGDVDNGRRVEISFLPDCPNKCCDGK

Sequences:

>Translated_136_residues
MPKFIVSLYLITSSPVFACIASENFDIYFSRDSSHISNAEIVRIAKWTIDQKLNYANHLTKETTLISGHAEESEPEALAL
AQSRLQTAYALLEQLGFLRGTIKKSVRVYSHGDVDNGRRVEISFLPDCPNKCCDGK
>Mature_135_residues
PKFIVSLYLITSSPVFACIASENFDIYFSRDSSHISNAEIVRIAKWTIDQKLNYANHLTKETTLISGHAEESEPEALALA
QSRLQTAYALLEQLGFLRGTIKKSVRVYSHGDVDNGRRVEISFLPDCPNKCCDGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15225; Mature: 15094

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKFIVSLYLITSSPVFACIASENFDIYFSRDSSHISNAEIVRIAKWTIDQKLNYANHLT
CCCCEEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECHHHHCCHHHHCC
KETTLISGHAEESEPEALALAQSRLQTAYALLEQLGFLRGTIKKSVRVYSHGDVDNGRRV
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEE
EISFLPDCPNKCCDGK
EEEECCCCCCCCCCCC
>Mature Secondary Structure 
PKFIVSLYLITSSPVFACIASENFDIYFSRDSSHISNAEIVRIAKWTIDQKLNYANHLT
CCCEEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECHHHHCCHHHHCC
KETTLISGHAEESEPEALALAQSRLQTAYALLEQLGFLRGTIKKSVRVYSHGDVDNGRRV
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEE
EISFLPDCPNKCCDGK
EEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA