Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688069

Identifier: 116688069

GI number: 116688069

Start: 47146

End: 47532

Strand: Reverse

Name: 116688069

Synonym: Bcen2424_0045

Alternate gene names: NA

Gene position: 47532-47146 (Counterclockwise)

Preceding gene: 116688070

Following gene: 116688067

Centisome position: 1.36

GC content: 61.24

Gene sequence:

>387_bases
GTGAAACTGCTGCTCGACACGCACCTGATTCTTTGGGCGGCCGCGGACGCGACCGAATTGCCCGATCGAGCCCGTACGCT
CATCGAGGATCCCGCCTATACCCTGTTGTTCAGCGTCGCGAGTCTCTGGGAGATCGTGATCAAGCGTGGGCTCGACCGCA
ATGATTTTCAGGTCGATCCGCACGTGCTGCGTCGCAATCTGCTCGACGCCGGCTACGTCGAATCGCCGATCACGAGCGCA
CATGTCCTCGCAGTCGAGCAACTGCCGCTGGTGCATCGCGATCCGTTCGATCGGCTGCTGATTGCCCAGGCGATTGCAGA
AGGCGTTACGTTTCTCACGCACGACCATACGGTTGCCCGGTATCCGGGCCCGATTCGGCACGTCTGA

Upstream 100 bases:

>100_bases
GACCGGCGCGGATCGGTTTCATGAAGGGTCAAATCGTGGTGCCGGCCGACTTCGATACGATGGGTGACGATGCCATCCGG
AAGCTGTTCGAGGGCGACGC

Downstream 100 bases:

>100_bases
TCACGCCGAGCGGGGGCGCAACCGTCACTCCCGCGCCCGCAATCCCCCGAACGCCAGATCGTCGGCCGGCGCGAGCGGCA
GCGTCGCCCGCGCGACGTCG

Product: PilT domain-containing protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like Protein; PilT Protein-Like; Pilus Retraction Motor Protein PilT; PIN Domain Family Protein; PilT Protein Domain Containing Protein; PilT-Like Protein; PIN Domain Protein; Xin Of A Toxin/Antitoxin System; PilT Protein N-Terminal

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDPHVLRRNLLDAGYVESPITSA
HVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVARYPGPIRHV

Sequences:

>Translated_128_residues
MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDPHVLRRNLLDAGYVESPITSA
HVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVARYPGPIRHV
>Mature_128_residues
MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDPHVLRRNLLDAGYVESPITSA
HVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVARYPGPIRHV

Specific function: Unknown

COG id: COG3744

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14448; Mature: 14448

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDP
CCCHHHHHEEEEECCCCHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
HVLRRNLLDAGYVESPITSAHVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVAR
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCC
YPGPIRHV
CCCCCCCC
>Mature Secondary Structure
MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDP
CCCHHHHHEEEEECCCCHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
HVLRRNLLDAGYVESPITSAHVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVAR
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCC
YPGPIRHV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA