| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is ybeZ [C]
Identifier: 116626739
GI number: 116626739
Start: 9686198
End: 9687304
Strand: Direct
Name: ybeZ [C]
Synonym: Acid_7711
Alternate gene names: 116626739
Gene position: 9686198-9687304 (Clockwise)
Preceding gene: 116626737
Following gene: 116626740
Centisome position: 97.2
GC content: 59.89
Gene sequence:
>1107_bases TTGGAGGTACCCAACACCCACTTGATGAAATCCAGCGTCCGTATCAGCCGAGGAATCGAAAGCCTCTACGGCACCCGCGA CGAAAACATCCGGCTCCTCGAAGCCGGCTTGGGTGTCCATACTCAGTTGATCGATAACAACCTCGAAATCGAAGGTGAAC CCGACGACGTTACGCGGGCGCAAAACATTCTGGAGGATTACAACACCCTTCTCCGGGAAGGTTTCGTCTTCAATAACGGC GACCTGAACAGCTACCTTCGGGTGGTCACCAAAGATCGCGAGGTCTCGCTCCGCGCTCTTGTCAACAGCGGCAAGCAGCG CAGCTTCGGCAAGAAGATTCTTGCGCCGAAAACCGTCAATCAGCGCCGCTACCTCGAGGCCATCGAACGCAACGACCTCG TGTTCGGCATCGGACCCGCCGGCACAGGTAAGACCTATCTCGCCGTTGCCATGGCGATCTCCGCGCTGATCAACAAACAG GTCTCACGCATCGTCCTCACCCGGCCCGCTGTGGAAGCCGGCGAACGCCTCGGATTCCTCCCCGGCACCCTGCAGGAAAA AATCGACCCCTACCTGCGCCCGCTTTACGACGCCCTCTACGACATGCTCGATAGCGAACGCGTCGAAAAGCTGCTCGAAC GCAATGTCATCGAAGTCGCGCCGATCGCCTTCATGCGCGGCCGCACCCTCAACGACAGTTTCATCATCCTGGACGAGGCG CAGAACTGTACCCCCGAGCAGATGAAGATGGTGCTCACCCGCCTCGGCTTCAATTCCAAGATGGTGGTCAACGGCGACAT CACGCAGATCGATCTGCCCAATGCGCGCCGCAGCGGACTGGTGGAAGCAACCGACGTGCTCCGCGGCGTCGAAGGCATCA CCTTTGTCCAATTCGACGACAAGGACGTCGTACGCCATACCCTCGTACAGCGCATGGTCAAGGCCTACGACCGCTACAAC GAAGCCATCGGCGCCGGACGCCAGTTCTCACTCAAATTGACCGAGCCCCCGGCCGAGAGCGTGAGTGCGAACACGAACGT GAGCACGAACGGTAACGGCGAGGTCCAGGTGGAGACCCCTGCGGCCGATTCCGCCTCGCAGGCCTGA
Upstream 100 bases:
>100_bases AATGGAGGCAGATGGTTTCCAGCTGCCCGCGCAAGCGGGTTGTCGAAGGTTCGACCCTCTACCGTTTGATCGTCCAACCT TGTCGCCTTTTTTCCCCTGC
Downstream 100 bases:
>100_bases GCTCCGCCATGTCCTCCCCCGAAGGCAGTAGCGTCACGTTCCGTCGCGCTCCCGCCACTCTACGCCGCCCCGCGATCGAA CGCTTCGCCCGCCGCCTTCA
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MEVPNTHLMKSSVRISRGIESLYGTRDENIRLLEAGLGVHTQLIDNNLEIEGEPDDVTRAQNILEDYNTLLREGFVFNNG DLNSYLRVVTKDREVSLRALVNSGKQRSFGKKILAPKTVNQRRYLEAIERNDLVFGIGPAGTGKTYLAVAMAISALINKQ VSRIVLTRPAVEAGERLGFLPGTLQEKIDPYLRPLYDALYDMLDSERVEKLLERNVIEVAPIAFMRGRTLNDSFIILDEA QNCTPEQMKMVLTRLGFNSKMVVNGDITQIDLPNARRSGLVEATDVLRGVEGITFVQFDDKDVVRHTLVQRMVKAYDRYN EAIGAGRQFSLKLTEPPAESVSANTNVSTNGNGEVQVETPAADSASQA
Sequences:
>Translated_368_residues MEVPNTHLMKSSVRISRGIESLYGTRDENIRLLEAGLGVHTQLIDNNLEIEGEPDDVTRAQNILEDYNTLLREGFVFNNG DLNSYLRVVTKDREVSLRALVNSGKQRSFGKKILAPKTVNQRRYLEAIERNDLVFGIGPAGTGKTYLAVAMAISALINKQ VSRIVLTRPAVEAGERLGFLPGTLQEKIDPYLRPLYDALYDMLDSERVEKLLERNVIEVAPIAFMRGRTLNDSFIILDEA QNCTPEQMKMVLTRLGFNSKMVVNGDITQIDLPNARRSGLVEATDVLRGVEGITFVQFDDKDVVRHTLVQRMVKAYDRYN EAIGAGRQFSLKLTEPPAESVSANTNVSTNGNGEVQVETPAADSASQA >Mature_368_residues MEVPNTHLMKSSVRISRGIESLYGTRDENIRLLEAGLGVHTQLIDNNLEIEGEPDDVTRAQNILEDYNTLLREGFVFNNG DLNSYLRVVTKDREVSLRALVNSGKQRSFGKKILAPKTVNQRRYLEAIERNDLVFGIGPAGTGKTYLAVAMAISALINKQ VSRIVLTRPAVEAGERLGFLPGTLQEKIDPYLRPLYDALYDMLDSERVEKLLERNVIEVAPIAFMRGRTLNDSFIILDEA QNCTPEQMKMVLTRLGFNSKMVVNGDITQIDLPNARRSGLVEATDVLRGVEGITFVQFDDKDVVRHTLVQRMVKAYDRYN EAIGAGRQFSLKLTEPPAESVSANTNVSTNGNGEVQVETPAADSASQA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=307, Percent_Identity=52.7687296416938, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1787257, Length=198, Percent_Identity=48.989898989899, Blast_Score=194, Evalue=7e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004087 - InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 40885; Mature: 40885
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVPNTHLMKSSVRISRGIESLYGTRDENIRLLEAGLGVHTQLIDNNLEIEGEPDDVTRA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCEECCCCHHHHHH QNILEDYNTLLREGFVFNNGDLNSYLRVVTKDREVSLRALVNSGKQRSFGKKILAPKTVN HHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCHHCCCCCCC QRRYLEAIERNDLVFGIGPAGTGKTYLAVAMAISALINKQVSRIVLTRPAVEAGERLGFL HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCC PGTLQEKIDPYLRPLYDALYDMLDSERVEKLLERNVIEVAPIAFMRGRTLNDSFIILDEA CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHCCHHHHCCCCCCCCEEEEECC QNCTPEQMKMVLTRLGFNSKMVVNGDITQIDLPNARRSGLVEATDVLRGVEGITFVQFDD CCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHCCCHHHHHHHHCCCCEEEEEECC KDVVRHTLVQRMVKAYDRYNEAIGAGRQFSLKLTEPPAESVSANTNVSTNGNGEVQVETP HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCCCCCCCCCCEEEEECC AADSASQA CCCCCCCC >Mature Secondary Structure MEVPNTHLMKSSVRISRGIESLYGTRDENIRLLEAGLGVHTQLIDNNLEIEGEPDDVTRA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCEECCCCHHHHHH QNILEDYNTLLREGFVFNNGDLNSYLRVVTKDREVSLRALVNSGKQRSFGKKILAPKTVN HHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCHHCCCCCCC QRRYLEAIERNDLVFGIGPAGTGKTYLAVAMAISALINKQVSRIVLTRPAVEAGERLGFL HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCC PGTLQEKIDPYLRPLYDALYDMLDSERVEKLLERNVIEVAPIAFMRGRTLNDSFIILDEA CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHCCHHHHCCCCCCCCEEEEECC QNCTPEQMKMVLTRLGFNSKMVVNGDITQIDLPNARRSGLVEATDVLRGVEGITFVQFDD CCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHCCCHHHHHHHHCCCCEEEEEECC KDVVRHTLVQRMVKAYDRYNEAIGAGRQFSLKLTEPPAESVSANTNVSTNGNGEVQVETP HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCCCCCCCCCCEEEEECC AADSASQA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]