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The map label for this gene is 116626737

Identifier: 116626737

GI number: 116626737

Start: 9683096

End: 9684736

Strand: Direct

Name: 116626737

Synonym: Acid_7709

Alternate gene names: NA

Gene position: 9683096-9684736 (Clockwise)

Preceding gene: 116626733

Following gene: 116626739

Centisome position: 97.16

GC content: 64.17

Gene sequence:

>1641_bases
ATGTTCAGAGCCTTTGGTCCAGTCCTCGCGGCTTCCTTCGCGCTAGCTGCCGCGCCGGCGGCCCAGCTTTCCATTCAACT
CTCCGACCCCTCCGGCAAGCCCATTAGCGGCGCCCAGATCACCCTGACCGCGCCGTCTTCCATCGCACTTACCGATGTCG
CAGGCAAGGCCTCCATCGAATATCAGGCCGCCTCCGGACCCCTCGCATTCAAAATCATCCGCCCGTCCGGCCTCGTGATC
GTCTCGCCCTGGCAAGGCAGCACATCCGTGCCGCCCAATGTTCAAACGCTGATAGCCGCAACGCACGCGCAGGTCGCGGC
GCTGCAGTCCCCGGCCGTGGTCAAAGCCGCCGTCGCCAAAGTGAACAACCTGCAGCGACCGGTCAGCGCCACCGGCCTGC
AGGAAGCCAACGCTCCCCCGAAGTATTACCTGGACCGCGCCGCCAAAGAGATGGGCGTGGATCCCGACCGTCTCGAAGCT
GTCCTTCGCCGGCTGCGGACTGAGAGCCCCGAACCCTACGAGCGCGGCATGGCCAACCTGTATCAACGCGACTACCAGCA
GGCTGCGCAAGACCTCGCCGCCGCGCTTCTCAAAGCCGAGCAGCAGGTTCCGCCGAACCCCCGCGAGATCTCCAATGCCG
CCGCCTTCCTCGGCCAGACTTACTTCAATCAGGGCAGATACACCCTCGCCTCCAACGCCTACCTCAGGGCCATCCAGGCT
CGCCCCGATGATCCCGCGCTACTCAACAACCTCGGCAACAGCCTGAGCCGCGCCGGCCTCTATCGCCAGGCCAGGCCCGT
CTACCAGCGCGCCATTGATATCCTCGCCAAACAACCCGACCGGGATCCACTGGAACTCCAGATCGCCAACAGCAACCTCG
CCGCTCTTTACGTCTACGCGGGAGACTATGCCGGTGCCGAGCCGATTCTCCGCCGCGTACTCAATATCAACGAGTCCCTT
TCACCCCGCGATCCTAATGTCGCCGGCGCTCTCAACAACCTCGCCGCGATCTTGCTTGCTCAGCAGAAATGCGCTGAAGC
TCGCCCGCTGCTCGAGCGCGCCGTACAGATCCAACGCGAGACTTCCACGCATAACAGTGCCGCCGCCCCATCCAAGGACA
TCGCCGTTTTGGACAGCCAGTTCCGGAATCCGCCCTCGCTGATGCAGAGTCGAAGTCTGACCTTCCAACGGTCGGGCATA
GGACCCGGCACTCCGGGACTCAACTCCACCATGGTCAACCTCGCCTCGCTCTTGGTCTGCGAAGGCAAGGGCGCTCAGGC
CCGTGACGTTCTGGATGCCACGATTGAGCGCGAAACCGTCGAACTCGCCCCAGGCCATCCCGATCTCGCAACCCCGCTCA
ACATCCTCGCGCAAGCGCAACTGCAGCTCGGCGACTCCCCGGCGGCCGAGCAGAACCTCCGCCGCGCACTCCAGATTCAA
GTTGCCGCCCTCACTCCCGAGCACCCCGTGCTCGCATTGACTCGCATCAATCTCGCCGCCCTCCTGGCTCGCGATGGCCG
CGCCGCCGAGGCGCAGACTCTCTACCATCAGGCCGAGAACAGTCTCGTCAAAGCCTTCGGTGACCCCAGCCCGCCAGTCC
AACAGGTCCGCGATGCGCTCTCCAAACTCAACGGTCGATAA

Upstream 100 bases:

>100_bases
CCCGTGCCCGCACCACATCGGCGATGAAATTGTGCGTTTCCTACCAGGTGAAACGCCGGGGAATTACGATAGACTACGGA
GCAGTTCTCTGGGGATTTAA

Downstream 100 bases:

>100_bases
CGATGAACGCAGCCGTATCTCCAGCCGGATGCCCCTGCAGCACGGGCCTATACCCTTGCTTCTCTACTCTCAGTTGCACA
ACCTGCCCGTTCGCCGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; Tetratricopeptide TPR_2 Repeat Protein; Kinesin Light Chain; NB-ARC Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; NB-ARC Domain Protein; SEC-C Motif Domain Protein; Tetratricopeptide Repeat-Containing Protein; Nb-Arc; Peptidase-Like

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MFRAFGPVLAASFALAAAPAAQLSIQLSDPSGKPISGAQITLTAPSSIALTDVAGKASIEYQAASGPLAFKIIRPSGLVI
VSPWQGSTSVPPNVQTLIAATHAQVAALQSPAVVKAAVAKVNNLQRPVSATGLQEANAPPKYYLDRAAKEMGVDPDRLEA
VLRRLRTESPEPYERGMANLYQRDYQQAAQDLAAALLKAEQQVPPNPREISNAAAFLGQTYFNQGRYTLASNAYLRAIQA
RPDDPALLNNLGNSLSRAGLYRQARPVYQRAIDILAKQPDRDPLELQIANSNLAALYVYAGDYAGAEPILRRVLNINESL
SPRDPNVAGALNNLAAILLAQQKCAEARPLLERAVQIQRETSTHNSAAAPSKDIAVLDSQFRNPPSLMQSRSLTFQRSGI
GPGTPGLNSTMVNLASLLVCEGKGAQARDVLDATIERETVELAPGHPDLATPLNILAQAQLQLGDSPAAEQNLRRALQIQ
VAALTPEHPVLALTRINLAALLARDGRAAEAQTLYHQAENSLVKAFGDPSPPVQQVRDALSKLNGR

Sequences:

>Translated_546_residues
MFRAFGPVLAASFALAAAPAAQLSIQLSDPSGKPISGAQITLTAPSSIALTDVAGKASIEYQAASGPLAFKIIRPSGLVI
VSPWQGSTSVPPNVQTLIAATHAQVAALQSPAVVKAAVAKVNNLQRPVSATGLQEANAPPKYYLDRAAKEMGVDPDRLEA
VLRRLRTESPEPYERGMANLYQRDYQQAAQDLAAALLKAEQQVPPNPREISNAAAFLGQTYFNQGRYTLASNAYLRAIQA
RPDDPALLNNLGNSLSRAGLYRQARPVYQRAIDILAKQPDRDPLELQIANSNLAALYVYAGDYAGAEPILRRVLNINESL
SPRDPNVAGALNNLAAILLAQQKCAEARPLLERAVQIQRETSTHNSAAAPSKDIAVLDSQFRNPPSLMQSRSLTFQRSGI
GPGTPGLNSTMVNLASLLVCEGKGAQARDVLDATIERETVELAPGHPDLATPLNILAQAQLQLGDSPAAEQNLRRALQIQ
VAALTPEHPVLALTRINLAALLARDGRAAEAQTLYHQAENSLVKAFGDPSPPVQQVRDALSKLNGR
>Mature_546_residues
MFRAFGPVLAASFALAAAPAAQLSIQLSDPSGKPISGAQITLTAPSSIALTDVAGKASIEYQAASGPLAFKIIRPSGLVI
VSPWQGSTSVPPNVQTLIAATHAQVAALQSPAVVKAAVAKVNNLQRPVSATGLQEANAPPKYYLDRAAKEMGVDPDRLEA
VLRRLRTESPEPYERGMANLYQRDYQQAAQDLAAALLKAEQQVPPNPREISNAAAFLGQTYFNQGRYTLASNAYLRAIQA
RPDDPALLNNLGNSLSRAGLYRQARPVYQRAIDILAKQPDRDPLELQIANSNLAALYVYAGDYAGAEPILRRVLNINESL
SPRDPNVAGALNNLAAILLAQQKCAEARPLLERAVQIQRETSTHNSAAAPSKDIAVLDSQFRNPPSLMQSRSLTFQRSGI
GPGTPGLNSTMVNLASLLVCEGKGAQARDVLDATIERETVELAPGHPDLATPLNILAQAQLQLGDSPAAEQNLRRALQIQ
VAALTPEHPVLALTRINLAALLARDGRAAEAQTLYHQAENSLVKAFGDPSPPVQQVRDALSKLNGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI34304360, Length=290, Percent_Identity=29.3103448275862, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI41871960, Length=260, Percent_Identity=31.1538461538462, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI41871955, Length=260, Percent_Identity=31.1538461538462, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI41871946, Length=260, Percent_Identity=31.1538461538462, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI198041728, Length=247, Percent_Identity=29.5546558704453, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI198041734, Length=247, Percent_Identity=29.5546558704453, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI198041731, Length=247, Percent_Identity=29.5546558704453, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI12383062, Length=247, Percent_Identity=29.5546558704453, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI194306559, Length=228, Percent_Identity=29.8245614035088, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI110735431, Length=228, Percent_Identity=29.8245614035088, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI33620730, Length=228, Percent_Identity=29.8245614035088, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI91825557, Length=151, Percent_Identity=34.4370860927152, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71984535, Length=228, Percent_Identity=29.8245614035088, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71984527, Length=228, Percent_Identity=29.8245614035088, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71984517, Length=228, Percent_Identity=29.8245614035088, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71984524, Length=228, Percent_Identity=29.8245614035088, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI17647555, Length=251, Percent_Identity=30.2788844621514, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58206; Mature: 58206

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRAFGPVLAASFALAAAPAAQLSIQLSDPSGKPISGAQITLTAPSSIALTDVAGKASIE
CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCEEE
YQAASGPLAFKIIRPSGLVIVSPWQGSTSVPPNVQTLIAATHAQVAALQSPAVVKAAVAK
EEECCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
VNNLQRPVSATGLQEANAPPKYYLDRAAKEMGVDPDRLEAVLRRLRTESPEPYERGMANL
HHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
YQRDYQQAAQDLAAALLKAEQQVPPNPREISNAAAFLGQTYFNQGRYTLASNAYLRAIQA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHEEEEC
RPDDPALLNNLGNSLSRAGLYRQARPVYQRAIDILAKQPDRDPLELQIANSNLAALYVYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEE
GDYAGAEPILRRVLNINESLSPRDPNVAGALNNLAAILLAQQKCAEARPLLERAVQIQRE
CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSTHNSAAAPSKDIAVLDSQFRNPPSLMQSRSLTFQRSGIGPGTPGLNSTMVNLASLLVC
HCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHEE
EGKGAQARDVLDATIERETVELAPGHPDLATPLNILAQAQLQLGDSPAAEQNLRRALQIQ
CCCCCCHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEE
VAALTPEHPVLALTRINLAALLARDGRAAEAQTLYHQAENSLVKAFGDPSPPVQQVRDAL
EEEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SKLNGR
HHHCCC
>Mature Secondary Structure
MFRAFGPVLAASFALAAAPAAQLSIQLSDPSGKPISGAQITLTAPSSIALTDVAGKASIE
CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCEEE
YQAASGPLAFKIIRPSGLVIVSPWQGSTSVPPNVQTLIAATHAQVAALQSPAVVKAAVAK
EEECCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
VNNLQRPVSATGLQEANAPPKYYLDRAAKEMGVDPDRLEAVLRRLRTESPEPYERGMANL
HHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
YQRDYQQAAQDLAAALLKAEQQVPPNPREISNAAAFLGQTYFNQGRYTLASNAYLRAIQA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHEEEEC
RPDDPALLNNLGNSLSRAGLYRQARPVYQRAIDILAKQPDRDPLELQIANSNLAALYVYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEE
GDYAGAEPILRRVLNINESLSPRDPNVAGALNNLAAILLAQQKCAEARPLLERAVQIQRE
CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSTHNSAAAPSKDIAVLDSQFRNPPSLMQSRSLTFQRSGIGPGTPGLNSTMVNLASLLVC
HCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHEE
EGKGAQARDVLDATIERETVELAPGHPDLATPLNILAQAQLQLGDSPAAEQNLRRALQIQ
CCCCCCHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEE
VAALTPEHPVLALTRINLAALLARDGRAAEAQTLYHQAENSLVKAFGDPSPPVQQVRDAL
EEEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SKLNGR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA