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The map label for this gene is rrf2 [H]

Identifier: 116626733

GI number: 116626733

Start: 9678255

End: 9678731

Strand: Direct

Name: rrf2 [H]

Synonym: Acid_7705

Alternate gene names: 116626733

Gene position: 9678255-9678731 (Clockwise)

Preceding gene: 116626732

Following gene: 116626737

Centisome position: 97.12

GC content: 63.1

Gene sequence:

>477_bases
ATGAAATTGAGCGCCAACGAAGAATACGGATTGCGCTGTCTGGTGCGCATCGGCTACGCCGGCGAAGGCGGCAGCCTCAC
CATTCCCGAAATGAGCCAGGCCGAAGGCGTATCGCCCGCCTATGCTGCTAAAGTTCTCCGCGTGCTCCGCAAGGGTGGCT
TCGTCAAAGCCGCCCGCGGCAAGGATGGAGGCTACACCCTTGCCCGCCCCGCCGAAGCCATCGTGATCGGCGACGTGATG
GACGTCCTCGGCGGCCGCATCTTCGAAAGCAGCTTCTGCGAGAGCCATGCCGGTCAGGCCGCCATCTGCACGCGCAGCAT
CGATTGCTCCGTCCGCTCTCTTTGGCGCGCCGTCCAGGTCGCGGTGGACCAGGTCCTCAGTAAAGCCACCCTCCGCGACC
TGCTCCAAAACGAAGAAGAAATGAACTCCTGGGTCCGCACCATCCCGGGCGCCAAAGGTCTCCACTCCATCCAGTAG

Upstream 100 bases:

>100_bases
AACTCACCTTCGATCCGCCCTGGACCAAGGCCCGCATGTCGGAAGCGGCCAAGCTCGCTTGCGGCATCGAAGACATCATC
CCGATTGCGAGGCTCCGCCG

Downstream 100 bases:

>100_bases
CGACCGCGACCGTCAGGAAGCGACCGAACCCGCGCCCAATCCTCGTCCCCTCAACCGTAAACACTGCCCGCCCTCGCTCC
GAGCCGCGACCGTCGGGACG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKLSANEEYGLRCLVRIGYAGEGGSLTIPEMSQAEGVSPAYAAKVLRVLRKGGFVKAARGKDGGYTLARPAEAIVIGDVM
DVLGGRIFESSFCESHAGQAAICTRSIDCSVRSLWRAVQVAVDQVLSKATLRDLLQNEEEMNSWVRTIPGAKGLHSIQ

Sequences:

>Translated_158_residues
MKLSANEEYGLRCLVRIGYAGEGGSLTIPEMSQAEGVSPAYAAKVLRVLRKGGFVKAARGKDGGYTLARPAEAIVIGDVM
DVLGGRIFESSFCESHAGQAAICTRSIDCSVRSLWRAVQVAVDQVLSKATLRDLLQNEEEMNSWVRTIPGAKGLHSIQ
>Mature_158_residues
MKLSANEEYGLRCLVRIGYAGEGGSLTIPEMSQAEGVSPAYAAKVLRVLRKGGFVKAARGKDGGYTLARPAEAIVIGDVM
DVLGGRIFESSFCESHAGQAAICTRSIDCSVRSLWRAVQVAVDQVLSKATLRDLLQNEEEMNSWVRTIPGAKGLHSIQ

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=145, Percent_Identity=33.7931034482759, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788880, Length=142, Percent_Identity=25.3521126760563, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16956; Mature: 16956

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSANEEYGLRCLVRIGYAGEGGSLTIPEMSQAEGVSPAYAAKVLRVLRKGGFVKAARG
CCCCCCCCCCCEEEEEEEECCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHCCCEEECCC
KDGGYTLARPAEAIVIGDVMDVLGGRIFESSFCESHAGQAAICTRSIDCSVRSLWRAVQV
CCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
AVDQVLSKATLRDLLQNEEEMNSWVRTIPGAKGLHSIQ
HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKLSANEEYGLRCLVRIGYAGEGGSLTIPEMSQAEGVSPAYAAKVLRVLRKGGFVKAARG
CCCCCCCCCCCEEEEEEEECCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHCCCEEECCC
KDGGYTLARPAEAIVIGDVMDVLGGRIFESSFCESHAGQAAICTRSIDCSVRSLWRAVQV
CCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
AVDQVLSKATLRDLLQNEEEMNSWVRTIPGAKGLHSIQ
HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]