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The map label for this gene is sufB [C]

Identifier: 116626727

GI number: 116626727

Start: 9672761

End: 9674209

Strand: Direct

Name: sufB [C]

Synonym: Acid_7699

Alternate gene names: 116626727

Gene position: 9672761-9674209 (Clockwise)

Preceding gene: 116626723

Following gene: 116626728

Centisome position: 97.06

GC content: 59.63

Gene sequence:

>1449_bases
GTGAGCGATTCCACCAACACGATCGAAACATTTGCCAATCAGGAATATAAGTGGGGCTTCGTCACCGACATCGAAGCCGA
CGCTATTCCCCGCGGCCTCAACGAGGACGTGGTCCGCTTAATTTCGGCCAAGAAAAACGAGCCCGAGTGGCTCCTGGAGT
GGCGCCTCAAGGCCTATCGCCACTGGCTTACCCTCAAGGAACCCGATTGGGCCAACGTCCACTACCCCAAAATCGACTAT
CAGGACATCATCTACTACTCTTCCCCGAAGGCCAAAGCCGACGGGCCCAAGAGCCTCGATGAAGTGGATCCGGAACTCCT
CAAGACATACGAGAAGCTCGGCATCCCGCTCCAGGAACGCGCCATCCTTGCCGGTGTCGCGGTAGACGCGGTTTTCGACA
GCGTCTCGGTCGCTACCACCTTCAAGGAAAAGCTCAAAGAGCAGGGCATCATCTTCGGATCCTTCTCCGAAGCCGTCCAG
GAGCATCCCGAGCTCGTCCGTCAGTACCTGGGTTCCGTGGTCCCCACCAGCGATAATTTCTTCGCCGCGCTCAACTCCGC
CGTCTTCAGCGATGGCAGCTTCTGTTATATCCCCAAGGGCGTCAAGTGCCCCATGGAGCTCTCCACCTACTTCCGCATCA
ACGCCAAGGATACCGGCCAGTTCGAGCGTACCCTGATCGTCGCCGACGAAGGCGCCACCGTCAGCTACCTCGAAGGCTGC
ACCGCGCCCATGCGCGATACCAACCAGCTCCACGCCGCCGTGGTCGAGCTCGTCGCCCTCGACAACGCCCAGATCAAGTA
CTCCACCGTGCAGAACTGGTACCCCGGCGATAAGGACGGCAAGGGCGGCATCTACAACTTCGTCACCAAGCGCGGCGCCT
GCCGCGGCGTCAATTCCAAGATCTCCTGGACCCAGGTCGAGACCGGCTCAGCCATCACCTGGAAATACCCCAGCTGCCTC
CTGATCGGCGATAACTCGGTGGGCGAGTTCTATTCCGTGGCGCTGACCAACAACTGGCAGCAGGCCGATACCGGCACCAA
GATGATCCACATCGGGAAGAACACAACGTCCACCATCGTCAGCAAGGGCATCTCGGCCGGACACGGCCAGAACACCTACC
GCGGCGGCGTCAAAATCCTCAAATCGGCCACCGGAGCACGCAACTATTCGCAGTGCGATTCCCTCCTGCTCGGCGATAAA
TGCGGCGCGCACACCTTCCCCTACCTGGAAGTGCGCAACACCTCGGCGCAGGTGGAACACGAAGCCTCCACGTCGAAAAT
CGGCGAAGACCAGATCTTCTACTGCCGCCAGCGCGGCATCTCCACCGAAGATGCGGTCTCGATGATCGTCCACGGCTTCT
GCAAGGAAGTCTTCCGCGAACTCCCCATGGAATTCGCCGTGGAAGCCCAGAAATTGCTCGGAGTCAGTCTCGAAGGAAGC
GTTGGTTAA

Upstream 100 bases:

>100_bases
CCATTCGCCCCGCTCCCGCATCCATTGACTGGGTAATCTTGACTAAAAAGTGCAGATTAGGGAAAATGAAGGTAGCCCAA
CAGTTTAGGAGTACATCCTG

Downstream 100 bases:

>100_bases
GAGAAACAAGCGAATGGCACTACTCGAAATCAAAGATCTGCACGCCAAAGTCGGCGAACGTGAAATTCTGAAGGGCATCA
ATCTCACCGTGAACGCGGGC

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MSDSTNTIETFANQEYKWGFVTDIEADAIPRGLNEDVVRLISAKKNEPEWLLEWRLKAYRHWLTLKEPDWANVHYPKIDY
QDIIYYSSPKAKADGPKSLDEVDPELLKTYEKLGIPLQERAILAGVAVDAVFDSVSVATTFKEKLKEQGIIFGSFSEAVQ
EHPELVRQYLGSVVPTSDNFFAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINAKDTGQFERTLIVADEGATVSYLEGC
TAPMRDTNQLHAAVVELVALDNAQIKYSTVQNWYPGDKDGKGGIYNFVTKRGACRGVNSKISWTQVETGSAITWKYPSCL
LIGDNSVGEFYSVALTNNWQQADTGTKMIHIGKNTTSTIVSKGISAGHGQNTYRGGVKILKSATGARNYSQCDSLLLGDK
CGAHTFPYLEVRNTSAQVEHEASTSKIGEDQIFYCRQRGISTEDAVSMIVHGFCKEVFRELPMEFAVEAQKLLGVSLEGS
VG

Sequences:

>Translated_482_residues
MSDSTNTIETFANQEYKWGFVTDIEADAIPRGLNEDVVRLISAKKNEPEWLLEWRLKAYRHWLTLKEPDWANVHYPKIDY
QDIIYYSSPKAKADGPKSLDEVDPELLKTYEKLGIPLQERAILAGVAVDAVFDSVSVATTFKEKLKEQGIIFGSFSEAVQ
EHPELVRQYLGSVVPTSDNFFAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINAKDTGQFERTLIVADEGATVSYLEGC
TAPMRDTNQLHAAVVELVALDNAQIKYSTVQNWYPGDKDGKGGIYNFVTKRGACRGVNSKISWTQVETGSAITWKYPSCL
LIGDNSVGEFYSVALTNNWQQADTGTKMIHIGKNTTSTIVSKGISAGHGQNTYRGGVKILKSATGARNYSQCDSLLLGDK
CGAHTFPYLEVRNTSAQVEHEASTSKIGEDQIFYCRQRGISTEDAVSMIVHGFCKEVFRELPMEFAVEAQKLLGVSLEGS
VG
>Mature_481_residues
SDSTNTIETFANQEYKWGFVTDIEADAIPRGLNEDVVRLISAKKNEPEWLLEWRLKAYRHWLTLKEPDWANVHYPKIDYQ
DIIYYSSPKAKADGPKSLDEVDPELLKTYEKLGIPLQERAILAGVAVDAVFDSVSVATTFKEKLKEQGIIFGSFSEAVQE
HPELVRQYLGSVVPTSDNFFAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINAKDTGQFERTLIVADEGATVSYLEGCT
APMRDTNQLHAAVVELVALDNAQIKYSTVQNWYPGDKDGKGGIYNFVTKRGACRGVNSKISWTQVETGSAITWKYPSCLL
IGDNSVGEFYSVALTNNWQQADTGTKMIHIGKNTTSTIVSKGISAGHGQNTYRGGVKILKSATGARNYSQCDSLLLGDKC
GAHTFPYLEVRNTSAQVEHEASTSKIGEDQIFYCRQRGISTEDAVSMIVHGFCKEVFRELPMEFAVEAQKLLGVSLEGSV
G

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=66.8058455114823, Blast_Score=679, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=28.7581699346405, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53334; Mature: 53202

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSTNTIETFANQEYKWGFVTDIEADAIPRGLNEDVVRLISAKKNEPEWLLEWRLKAYR
CCCCCCHHHHHCCCCCCCCEEEECCHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
HWLTLKEPDWANVHYPKIDYQDIIYYSSPKAKADGPKSLDEVDPELLKTYEKLGIPLQER
HHEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHH
AILAGVAVDAVFDSVSVATTFKEKLKEQGIIFGSFSEAVQEHPELVRQYLGSVVPTSDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCH
FAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINAKDTGQFERTLIVADEGATVSYLEGC
HHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCEEHHHHCC
TAPMRDTNQLHAAVVELVALDNAQIKYSTVQNWYPGDKDGKGGIYNFVTKRGACRGVNSK
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
ISWTQVETGSAITWKYPSCLLIGDNSVGEFYSVALTNNWQQADTGTKMIHIGKNTTSTIV
CEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHH
SKGISAGHGQNTYRGGVKILKSATGARNYSQCDSLLLGDKCGAHTFPYLEVRNTSAQVEH
HCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHH
EASTSKIGEDQIFYCRQRGISTEDAVSMIVHGFCKEVFRELPMEFAVEAQKLLGVSLEGS
CCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
VG
CC
>Mature Secondary Structure 
SDSTNTIETFANQEYKWGFVTDIEADAIPRGLNEDVVRLISAKKNEPEWLLEWRLKAYR
CCCCCHHHHHCCCCCCCCEEEECCHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
HWLTLKEPDWANVHYPKIDYQDIIYYSSPKAKADGPKSLDEVDPELLKTYEKLGIPLQER
HHEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHH
AILAGVAVDAVFDSVSVATTFKEKLKEQGIIFGSFSEAVQEHPELVRQYLGSVVPTSDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCH
FAALNSAVFSDGSFCYIPKGVKCPMELSTYFRINAKDTGQFERTLIVADEGATVSYLEGC
HHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCEEHHHHCC
TAPMRDTNQLHAAVVELVALDNAQIKYSTVQNWYPGDKDGKGGIYNFVTKRGACRGVNSK
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
ISWTQVETGSAITWKYPSCLLIGDNSVGEFYSVALTNNWQQADTGTKMIHIGKNTTSTIV
CEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHH
SKGISAGHGQNTYRGGVKILKSATGARNYSQCDSLLLGDKCGAHTFPYLEVRNTSAQVEH
HCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHH
EASTSKIGEDQIFYCRQRGISTEDAVSMIVHGFCKEVFRELPMEFAVEAQKLLGVSLEGS
CCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
VG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]