| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626723
Identifier: 116626723
GI number: 116626723
Start: 9669147
End: 9669596
Strand: Direct
Name: 116626723
Synonym: Acid_7695
Alternate gene names: NA
Gene position: 9669147-9669596 (Clockwise)
Preceding gene: 116626713
Following gene: 116626727
Centisome position: 97.02
GC content: 58.67
Gene sequence:
>450_bases ATGAGCGGCCACGCTGATCGGTTCTTCTTCGACACCAACATCCTGATTTACTGGCTGGATACGGCGGAGCCGAAGAAAAA CGCGGCAGCAAGGAACTGGGTGGCGGCGATTTGGGAAAGCCGCTGTGGCAACGTGAGCTGGCAGGTTCTCAACGAACTGT ACGCAACCGCGACTCACAAGCTTGGCACCCCACCGCCTGCCGTCCGCGAGTTGGTGGAAACCTATAGCCTCTTGAACCCG GTCGCATTCGACCTCCCATTGCTACATCGTGCCTGGCATTGGACGGACCACGCCCGTGTTCCCTATTGGGACGCCCTTAT CCTGGCGGCGGCCGAGTCGGCGGGCTGTAAATACCTCTTGAGCGAAGATTTCCAGACCGGGCGCCAGTTTGGAGACCTTA CGATTGTGAATCCATTCCTCACAAGCCCCGCGGATTTCGGACTCCAGTAG
Upstream 100 bases:
>100_bases ATGCGTCAAACCGACGAATACTGGGCGGCCTATGAGCGCATGAAAAAGATCCCGCCAATTCCCGGTCTTGCGGCCGGACG ATTGAGCCGGGAAAAGGCGA
Downstream 100 bases:
>100_bases CCCCTACTGTTCGTGGACGTCTTCCAGGTACGTGTAGCCGTGCAGCCCCTCTTCGTAGAAGCGCAGCAGGGCGCCGCTCT CTTCGTAGGTCAGCCGGCCC
Product: PilT domain-containing protein
Products: NA
Alternate protein names: PilT Protein Domain-Containing Protein; PilT-Like Protein; PIN Domain Protein; PilT Protein Domain Protein; PIN Domain-Containing Addiction Module; PilT Protein-Like; PilT Protein N-Terminal
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSGHADRFFFDTNILIYWLDTAEPKKNAAARNWVAAIWESRCGNVSWQVLNELYATATHKLGTPPPAVRELVETYSLLNP VAFDLPLLHRAWHWTDHARVPYWDALILAAAESAGCKYLLSEDFQTGRQFGDLTIVNPFLTSPADFGLQ
Sequences:
>Translated_149_residues MSGHADRFFFDTNILIYWLDTAEPKKNAAARNWVAAIWESRCGNVSWQVLNELYATATHKLGTPPPAVRELVETYSLLNP VAFDLPLLHRAWHWTDHARVPYWDALILAAAESAGCKYLLSEDFQTGRQFGDLTIVNPFLTSPADFGLQ >Mature_148_residues SGHADRFFFDTNILIYWLDTAEPKKNAAARNWVAAIWESRCGNVSWQVLNELYATATHKLGTPPPAVRELVETYSLLNPV AFDLPLLHRAWHWTDHARVPYWDALILAAAESAGCKYLLSEDFQTGRQFGDLTIVNPFLTSPADFGLQ
Specific function: Unknown
COG id: COG5573
COG function: function code R; Predicted nucleic-acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16835; Mature: 16704
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHADRFFFDTNILIYWLDTAEPKKNAAARNWVAAIWESRCGNVSWQVLNELYATATHK CCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC LGTPPPAVRELVETYSLLNPVAFDLPLLHRAWHWTDHARVPYWDALILAAAESAGCKYLL CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHH SEDFQTGRQFGDLTIVNPFLTSPADFGLQ HHHHHHHHHCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure SGHADRFFFDTNILIYWLDTAEPKKNAAARNWVAAIWESRCGNVSWQVLNELYATATHK CCCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC LGTPPPAVRELVETYSLLNPVAFDLPLLHRAWHWTDHARVPYWDALILAAAESAGCKYLL CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHH SEDFQTGRQFGDLTIVNPFLTSPADFGLQ HHHHHHHHHCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA