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The map label for this gene is csxA [H]

Identifier: 116626564

GI number: 116626564

Start: 9433061

End: 9435622

Strand: Direct

Name: csxA [H]

Synonym: Acid_7527

Alternate gene names: 116626564

Gene position: 9433061-9435622 (Clockwise)

Preceding gene: 116626559

Following gene: 116626567

Centisome position: 94.66

GC content: 62.45

Gene sequence:

>2562_bases
ATGCGCAATTTGCTTGTCCTGCTCGCATCCGCTTCGCTGGCCGCGGCTCAATCGAAGATCCCGCTGCGGGAGAACTGGTC
GATCCAGTCGTCGGCTGAGGTGCGCGAAAACGGCGCGGCGCTGTCGGCCGCCGGCTTCGCGCCGCGCGGATGGCACGCAG
CGACCGTGCCCACCACGGTCTTCAGCGCACTCGTGAAGGCGGGTGTCTACCCCGACCCCTACTTCGGCACGAACCTGCGA
TCCGTGCCCGGTACCAGCTATCCGATCGGCGTCAACTTCTCGAACTTGCCGATGCCGTCTGGCAGCCCTTTCCAGAAGTC
CTGGTGGTTCCGCACGGAGTTCAAACTGCCCGCGAACTATCGCGGCAAGACGGTCTGGCTGAATCTCGACGGCATCAACT
TTCGCGCCAACGTCTTTATGAACGGAAAGAGGATCGCGTCCTCCGACCAGGTTGCCGGCGCGTGGCGGCTCTTCCAACTT
GACGTGACCGCGGCGGCCAAGCCGGCCGGCAGTAACGCACTCGCGATCGAGATCTTCCCGCCCGAGCCGGGCGACCTGGC
GATCACGTTTGTCGATTGGAATCCGATGCCGCCCGACAAAGGCATGGGTCTGTGGCGCGAAGTTTCGATCAGCGCGACCG
GCCCGGTCGCGATCCGTTACCCGTTCGTCACCACCCACCTTGTCGGTCAAGGCGCAGAGATCTCGGTGCGCGCGGAGTTG
ACCAACGCGTCCGCCGTACCGGTCGAAGGCATCTTGCAGGGCCGCATCGAGAAGACGGAATTCTCCCAGGCGGTGAAGCT
AGCCGCGCACGAGACGAAGATCGTGCACCTGACGCCGGCCAAAGCCGAACGTCCGCGCCTCTGGTGGCCTGCGCAGGTCG
GTCCTCAGAATCTTTATCCGCTGGATCTCACCTTCGAGACCGGCGGTAAGGTGAGCGACGCCAGCCACACGGAGTTCGGC
ATCCGCGAAGTCACCAGCGAGCTCGACGCACAAGGCCACCGCCTCTTCCACATCAATGGCAAGAATATCCTGATCCGTGG
CGCCGGCTATACCTTCGACATGCTGCTGCGCTCTTCGCCGGAGCGCCAGGAAGCCGAGCTGCGCTATGTCCGCGACATGA
ATCTAAATGCGGTGCGCTTCGAAGGCAAGCTTGAGGACGATCGCTTTCTGGAATTGTGCGACCGCATGGGCATCCTGGTG
CTGGCCGGCTGGTGCTGCTGCGATCACTGGGAGAAATGGGACAAGTGGGACAAGGAAGATGAAACCGTCGCGGCCGATTC
CCTGCGCGATCAGCTGCGCCGCCTGGCACGCCATCCTTCGGTCTTCGACTGGCTGTACGGCAGCGACAATCCGCCGCCGC
CTCACATCGAACAGATCTATCGGGACGTGATCAGAGAGGTGGAGTGGCCCAACCCGTATCAATCGTCGGCCACTGCCAAA
AAGACGCCGGCCGGTGAGACCGGCCTGAAAATGACGGGGCCTTACGAATATGTTCCGCCCTCCTACTGGCTGCTCGACAC
CAAGGCTGGCGGCGCCCACGGCTTCAATACGGAGACCAGCCCCGGTCCCGCGCCGCCGCCGATCGAGAGTCTTCGGCGCA
TGCTGCCCGCCGACAAGCTGTGGCCGATCAACGCCGATTGGGATTATCACGCGGGCGGCGGCCAGTTCAAGAACATCAAG
GTCTTCACCGAAGCGCTGGACCAGCGCTACGGCCCGTCGAAATCCGCCGAGGAGTACGCGCGCAAGGCACAGGTGATGGC
CTACGAAGGCCATCGCGCGATGTTCGAGGCCTACGGCCGCAACAAGTACACATCCACGGGCGTGATCCAGTGGATGCTCA
ACAACGCGTGGCCGGGAATGATCTGGCATCTTTACGATTGGTACCTGCGACCAGGCGGCAGCTACTTCGGCGCCAAGAAG
GGCTGCGAACCCCTGCACGTGCAGTATTCGTATGACGACCGTTCCATCGTGGTCGTGAACTCGTACTATCACCCCTTCGC
CAACATGAAGGTGGTGGCGACGGCATACAACCTGGATATGACGCCGAAGTTCTCGCGCGAAGCGAAGATGGATTCCGAGC
CCGACAGCAGCACGCGCGTCTTCACGATCCCCGAAATCGAGGGCTTGAGTCCCACCTGGTTCCTCAGCCTGAAACTCGAG
GACCCGTCCGACGATGTGGTCAGCGAGAACTTCTACTGGTTCTCCACCAGGCCTGAAACCCTGGAGTGGGAGAAAGGCAA
CTGGTACACCACGCCCACCAAGACTTTCGCCGATTACACCGCGCTCCAAACACTCCCGCTCGTGGCGCTGAAGGTGGAAT
CGAAATCGACGGATCACTCAACCACCGTGACGGTCACCAATCCGGCGAAGACGCTGGCCTTCGCCGTGCGCCTCAAGGTC
AAGCGCGATACCGATGGCGAAGAGGTGTTGCCCGTGCTGTGGGAGGACAACTACTTCGCGCTGCTGCCCGGCCAATCGCG
CCAGGTGACCGCGACCTACCAGGCGAAAGACCTCGGCCCCGCGAAGCCCGTGGTCGAAGTCAGCGGCTGGAACGTAAACT
AG

Upstream 100 bases:

>100_bases
GGGATTCATCGGTTCCTGGGCTTGGGACGCTTCGTTTCAAAGACCCGCGCGGCGCGCATTCCACTACACTGAAATGTTCT
TTTCCTTGAGGAATTTTGCT

Downstream 100 bases:

>100_bases
CCGAACGGCGCCACACCGCGAAGCTTCTGGGAGCTGCGACCGCTAGGGAGCGATCTCGCAGTACGCGTAAGCCACGATTT
CAGTTTGCAGCTTGCCGCCT

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 853; Mature: 853

Protein sequence:

>853_residues
MRNLLVLLASASLAAAQSKIPLRENWSIQSSAEVRENGAALSAAGFAPRGWHAATVPTTVFSALVKAGVYPDPYFGTNLR
SVPGTSYPIGVNFSNLPMPSGSPFQKSWWFRTEFKLPANYRGKTVWLNLDGINFRANVFMNGKRIASSDQVAGAWRLFQL
DVTAAAKPAGSNALAIEIFPPEPGDLAITFVDWNPMPPDKGMGLWREVSISATGPVAIRYPFVTTHLVGQGAEISVRAEL
TNASAVPVEGILQGRIEKTEFSQAVKLAAHETKIVHLTPAKAERPRLWWPAQVGPQNLYPLDLTFETGGKVSDASHTEFG
IREVTSELDAQGHRLFHINGKNILIRGAGYTFDMLLRSSPERQEAELRYVRDMNLNAVRFEGKLEDDRFLELCDRMGILV
LAGWCCCDHWEKWDKWDKEDETVAADSLRDQLRRLARHPSVFDWLYGSDNPPPPHIEQIYRDVIREVEWPNPYQSSATAK
KTPAGETGLKMTGPYEYVPPSYWLLDTKAGGAHGFNTETSPGPAPPPIESLRRMLPADKLWPINADWDYHAGGGQFKNIK
VFTEALDQRYGPSKSAEEYARKAQVMAYEGHRAMFEAYGRNKYTSTGVIQWMLNNAWPGMIWHLYDWYLRPGGSYFGAKK
GCEPLHVQYSYDDRSIVVVNSYYHPFANMKVVATAYNLDMTPKFSREAKMDSEPDSSTRVFTIPEIEGLSPTWFLSLKLE
DPSDDVVSENFYWFSTRPETLEWEKGNWYTTPTKTFADYTALQTLPLVALKVESKSTDHSTTVTVTNPAKTLAFAVRLKV
KRDTDGEEVLPVLWEDNYFALLPGQSRQVTATYQAKDLGPAKPVVEVSGWNVN

Sequences:

>Translated_853_residues
MRNLLVLLASASLAAAQSKIPLRENWSIQSSAEVRENGAALSAAGFAPRGWHAATVPTTVFSALVKAGVYPDPYFGTNLR
SVPGTSYPIGVNFSNLPMPSGSPFQKSWWFRTEFKLPANYRGKTVWLNLDGINFRANVFMNGKRIASSDQVAGAWRLFQL
DVTAAAKPAGSNALAIEIFPPEPGDLAITFVDWNPMPPDKGMGLWREVSISATGPVAIRYPFVTTHLVGQGAEISVRAEL
TNASAVPVEGILQGRIEKTEFSQAVKLAAHETKIVHLTPAKAERPRLWWPAQVGPQNLYPLDLTFETGGKVSDASHTEFG
IREVTSELDAQGHRLFHINGKNILIRGAGYTFDMLLRSSPERQEAELRYVRDMNLNAVRFEGKLEDDRFLELCDRMGILV
LAGWCCCDHWEKWDKWDKEDETVAADSLRDQLRRLARHPSVFDWLYGSDNPPPPHIEQIYRDVIREVEWPNPYQSSATAK
KTPAGETGLKMTGPYEYVPPSYWLLDTKAGGAHGFNTETSPGPAPPPIESLRRMLPADKLWPINADWDYHAGGGQFKNIK
VFTEALDQRYGPSKSAEEYARKAQVMAYEGHRAMFEAYGRNKYTSTGVIQWMLNNAWPGMIWHLYDWYLRPGGSYFGAKK
GCEPLHVQYSYDDRSIVVVNSYYHPFANMKVVATAYNLDMTPKFSREAKMDSEPDSSTRVFTIPEIEGLSPTWFLSLKLE
DPSDDVVSENFYWFSTRPETLEWEKGNWYTTPTKTFADYTALQTLPLVALKVESKSTDHSTTVTVTNPAKTLAFAVRLKV
KRDTDGEEVLPVLWEDNYFALLPGQSRQVTATYQAKDLGPAKPVVEVSGWNVN
>Mature_853_residues
MRNLLVLLASASLAAAQSKIPLRENWSIQSSAEVRENGAALSAAGFAPRGWHAATVPTTVFSALVKAGVYPDPYFGTNLR
SVPGTSYPIGVNFSNLPMPSGSPFQKSWWFRTEFKLPANYRGKTVWLNLDGINFRANVFMNGKRIASSDQVAGAWRLFQL
DVTAAAKPAGSNALAIEIFPPEPGDLAITFVDWNPMPPDKGMGLWREVSISATGPVAIRYPFVTTHLVGQGAEISVRAEL
TNASAVPVEGILQGRIEKTEFSQAVKLAAHETKIVHLTPAKAERPRLWWPAQVGPQNLYPLDLTFETGGKVSDASHTEFG
IREVTSELDAQGHRLFHINGKNILIRGAGYTFDMLLRSSPERQEAELRYVRDMNLNAVRFEGKLEDDRFLELCDRMGILV
LAGWCCCDHWEKWDKWDKEDETVAADSLRDQLRRLARHPSVFDWLYGSDNPPPPHIEQIYRDVIREVEWPNPYQSSATAK
KTPAGETGLKMTGPYEYVPPSYWLLDTKAGGAHGFNTETSPGPAPPPIESLRRMLPADKLWPINADWDYHAGGGQFKNIK
VFTEALDQRYGPSKSAEEYARKAQVMAYEGHRAMFEAYGRNKYTSTGVIQWMLNNAWPGMIWHLYDWYLRPGGSYFGAKK
GCEPLHVQYSYDDRSIVVVNSYYHPFANMKVVATAYNLDMTPKFSREAKMDSEPDSSTRVFTIPEIEGLSPTWFLSLKLE
DPSDDVVSENFYWFSTRPETLEWEKGNWYTTPTKTFADYTALQTLPLVALKVESKSTDHSTTVTVTNPAKTLAFAVRLKV
KRDTDGEEVLPVLWEDNYFALLPGQSRQVTATYQAKDLGPAKPVVEVSGWNVN

Specific function: Hydrolyzes chitosan and chitooligosaccharides with retention of anomeric configuration. Has no beta-mannosidase activity [H]

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Secreted, extracellular space [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 2 family [H]

Homologues:

Organism=Homo sapiens, GI84798622, Length=707, Percent_Identity=22.0650636492221, Blast_Score=91, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008979
- InterPro:   IPR013812
- InterPro:   IPR006104
- InterPro:   IPR006102
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00703 Glyco_hydro_2; PF02837 Glyco_hydro_2_N [H]

EC number: =3.2.1.165 [H]

Molecular weight: Translated: 95576; Mature: 95576

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLLVLLASASLAAAQSKIPLRENWSIQSSAEVRENGAALSAAGFAPRGWHAATVPTTV
CCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCEECCHHHHH
FSALVKAGVYPDPYFGTNLRSVPGTSYPIGVNFSNLPMPSGSPFQKSWWFRTEFKLPANY
HHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC
RGKTVWLNLDGINFRANVFMNGKRIASSDQVAGAWRLFQLDVTAAAKPAGSNALAIEIFP
CCCEEEEEECCCEEEEEEEECCCEECCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
PEPGDLAITFVDWNPMPPDKGMGLWREVSISATGPVAIRYPFVTTHLVGQGAEISVRAEL
CCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEECEEEEEEECCCCEEEEEEEE
TNASAVPVEGILQGRIEKTEFSQAVKLAAHETKIVHLTPAKAERPRLWWPAQVGPQNLYP
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEECCCCCCCCCEE
LDLTFETGGKVSDASHTEFGIREVTSELDAQGHRLFHINGKNILIRGAGYTFDMLLRSSP
EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEHHHCCCC
ERQEAELRYVRDMNLNAVRFEGKLEDDRFLELCDRMGILVLAGWCCCDHWEKWDKWDKED
CHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCC
ETVAADSLRDQLRRLARHPSVFDWLYGSDNPPPPHIEQIYRDVIREVEWPNPYQSSATAK
CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
KTPAGETGLKMTGPYEYVPPSYWLLDTKAGGAHGFNTETSPGPAPPPIESLRRMLPADKL
CCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE
WPINADWDYHAGGGQFKNIKVFTEALDQRYGPSKSAEEYARKAQVMAYEGHRAMFEAYGR
EECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEEECCCHHHHHHHCC
NKYTSTGVIQWMLNNAWPGMIWHLYDWYLRPGGSYFGAKKGCEPLHVQYSYDDRSIVVVN
CCCCCCCEEEEEECCCCCCHHEEEEEHEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEE
SYYHPFANMKVVATAYNLDMTPKFSREAKMDSEPDSSTRVFTIPEIEGLSPTWFLSLKLE
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEC
DPSDDVVSENFYWFSTRPETLEWEKGNWYTTPTKTFADYTALQTLPLVALKVESKSTDHS
CCCCCHHCCCEEEEECCCCCEEECCCCEEECCCCHHHHHHHHHHCCEEEEEEECCCCCCC
TTVTVTNPAKTLAFAVRLKVKRDTDGEEVLPVLWEDNYFALLPGQSRQVTATYQAKDLGP
EEEEEECCHHHEEEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCC
AKPVVEVSGWNVN
CCCEEEECCCCCC
>Mature Secondary Structure
MRNLLVLLASASLAAAQSKIPLRENWSIQSSAEVRENGAALSAAGFAPRGWHAATVPTTV
CCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCEECCHHHHH
FSALVKAGVYPDPYFGTNLRSVPGTSYPIGVNFSNLPMPSGSPFQKSWWFRTEFKLPANY
HHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC
RGKTVWLNLDGINFRANVFMNGKRIASSDQVAGAWRLFQLDVTAAAKPAGSNALAIEIFP
CCCEEEEEECCCEEEEEEEECCCEECCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC
PEPGDLAITFVDWNPMPPDKGMGLWREVSISATGPVAIRYPFVTTHLVGQGAEISVRAEL
CCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEECEEEEEEECCCCEEEEEEEE
TNASAVPVEGILQGRIEKTEFSQAVKLAAHETKIVHLTPAKAERPRLWWPAQVGPQNLYP
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEECCCCCCCCCEE
LDLTFETGGKVSDASHTEFGIREVTSELDAQGHRLFHINGKNILIRGAGYTFDMLLRSSP
EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEHHHCCCC
ERQEAELRYVRDMNLNAVRFEGKLEDDRFLELCDRMGILVLAGWCCCDHWEKWDKWDKED
CHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCC
ETVAADSLRDQLRRLARHPSVFDWLYGSDNPPPPHIEQIYRDVIREVEWPNPYQSSATAK
CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
KTPAGETGLKMTGPYEYVPPSYWLLDTKAGGAHGFNTETSPGPAPPPIESLRRMLPADKL
CCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE
WPINADWDYHAGGGQFKNIKVFTEALDQRYGPSKSAEEYARKAQVMAYEGHRAMFEAYGR
EECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEEECCCHHHHHHHCC
NKYTSTGVIQWMLNNAWPGMIWHLYDWYLRPGGSYFGAKKGCEPLHVQYSYDDRSIVVVN
CCCCCCCEEEEEECCCCCCHHEEEEEHEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEE
SYYHPFANMKVVATAYNLDMTPKFSREAKMDSEPDSSTRVFTIPEIEGLSPTWFLSLKLE
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEC
DPSDDVVSENFYWFSTRPETLEWEKGNWYTTPTKTFADYTALQTLPLVALKVESKSTDHS
CCCCCHHCCCEEEEECCCCCEEECCCCEEECCCCHHHHHHHHHHCCEEEEEEECCCCCCC
TTVTVTNPAKTLAFAVRLKVKRDTDGEEVLPVLWEDNYFALLPGQSRQVTATYQAKDLGP
EEEEEECCHHHEEEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCC
AKPVVEVSGWNVN
CCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]