| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116626559
Identifier: 116626559
GI number: 116626559
Start: 9426885
End: 9427649
Strand: Direct
Name: 116626559
Synonym: Acid_7522
Alternate gene names: NA
Gene position: 9426885-9427649 (Clockwise)
Preceding gene: 116626558
Following gene: 116626564
Centisome position: 94.59
GC content: 64.05
Gene sequence:
>765_bases ATGAGTTTGTTTTCCGAAATCGAGAAAACCATCGAGCACGGTTTCCGGCGCTGGACCGAACGCATGTTCGGACCGGCCGA TTCCAACGAACTGCTGCTGGTGCATCGGCGGATTCTGGAAGAGATCGAAAGTAAAGTTCAAGTGGTGGCGCGCGGACGCC GCGTGTTCCCGTTCGCACGCGTGACGGTGACGCTGGTGGCGGCAGAGCCCGAGCGGCGCACGCTGCTGCAGGCGGCGTTC GGAGAACGCCTTGCCGACGACGTTCGCGAGGCGATGGAAGGCTCGGGCTGCGAACTGCCGCACGGTTTTTCGGTCGAAGT GCGGACGGCCGAGGCAGGGCTCGGCGACTACCAGATCGAATATGGAGTTGCGCCCGCCGCGAAGCACGAGGAGGCCGCCG CCGGTCGCCTGGTGGTAGTGAAGGGCAAGACCGATCGCGCCGATTATTCGCTGGAGCGTGCGCGAATCAATATCGGCCGC ATGCCCGAGTTGACCGACGCCGATCACCGCGTGGTGCGACGCAACGACGTAGTCTTCGAAGAGGGCGCCGACGAGGCCAA CGCTACCGTTTCGCGCAAACACGCCCACATCCGGGCCGATGGCGCCGATTACCGGCTCTGCGACGATGGCAGTGAATTCG GCACGCGCGTTTTCCGCGAAGGCCGATCAATCGAAGTACCTGCGGGCGACCGCCGCGGCGAGAAGTTGCGCGCCGGCGAC GAAATTTATCTCGGACGCGCCTGCCTGCGATTTGAACGCGGCTGA
Upstream 100 bases:
>100_bases TTTCCGTCCTGGTGGAGAATGGGGTGTACGGCGGCACCGCGGCCGCCCCGGCTGCCACCGAGATTGTCAACGCAGCGGTC AAATTGGGAATGATTCAGCC
Downstream 100 bases:
>100_bases CCAGCCTAAGGTCGCGGCTCCGGCGGGATCGTGAGGTCGAGCTTCGTGACCTTACCCAAACCCGACAGCGGCGCCTCGAA GTCCTTTTCCTTGCCGAGCA
Product: FHA domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSLFSEIEKTIEHGFRRWTERMFGPADSNELLLVHRRILEEIESKVQVVARGRRVFPFARVTVTLVAAEPERRTLLQAAF GERLADDVREAMEGSGCELPHGFSVEVRTAEAGLGDYQIEYGVAPAAKHEEAAAGRLVVVKGKTDRADYSLERARINIGR MPELTDADHRVVRRNDVVFEEGADEANATVSRKHAHIRADGADYRLCDDGSEFGTRVFREGRSIEVPAGDRRGEKLRAGD EIYLGRACLRFERG
Sequences:
>Translated_254_residues MSLFSEIEKTIEHGFRRWTERMFGPADSNELLLVHRRILEEIESKVQVVARGRRVFPFARVTVTLVAAEPERRTLLQAAF GERLADDVREAMEGSGCELPHGFSVEVRTAEAGLGDYQIEYGVAPAAKHEEAAAGRLVVVKGKTDRADYSLERARINIGR MPELTDADHRVVRRNDVVFEEGADEANATVSRKHAHIRADGADYRLCDDGSEFGTRVFREGRSIEVPAGDRRGEKLRAGD EIYLGRACLRFERG >Mature_253_residues SLFSEIEKTIEHGFRRWTERMFGPADSNELLLVHRRILEEIESKVQVVARGRRVFPFARVTVTLVAAEPERRTLLQAAFG ERLADDVREAMEGSGCELPHGFSVEVRTAEAGLGDYQIEYGVAPAAKHEEAAAGRLVVVKGKTDRADYSLERARINIGRM PELTDADHRVVRRNDVVFEEGADEANATVSRKHAHIRADGADYRLCDDGSEFGTRVFREGRSIEVPAGDRRGEKLRAGDE IYLGRACLRFERG
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28481; Mature: 28350
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFSEIEKTIEHGFRRWTERMFGPADSNELLLVHRRILEEIESKVQVVARGRRVFPFAR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VTVTLVAAEPERRTLLQAAFGERLADDVREAMEGSGCELPHGFSVEVRTAEAGLGDYQIE EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEE YGVAPAAKHEEAAAGRLVVVKGKTDRADYSLERARINIGRMPELTDADHRVVRRNDVVFE ECCCCCCCCCHHCCCCEEEEECCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHCCCEEEE EGADEANATVSRKHAHIRADGADYRLCDDGSEFGTRVFREGRSIEVPAGDRRGEKLRAGD CCCCCCCCHHHHCCEEEEECCCCEEEECCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCC EIYLGRACLRFERG EEEECHHHHHCCCC >Mature Secondary Structure SLFSEIEKTIEHGFRRWTERMFGPADSNELLLVHRRILEEIESKVQVVARGRRVFPFAR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE VTVTLVAAEPERRTLLQAAFGERLADDVREAMEGSGCELPHGFSVEVRTAEAGLGDYQIE EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEE YGVAPAAKHEEAAAGRLVVVKGKTDRADYSLERARINIGRMPELTDADHRVVRRNDVVFE ECCCCCCCCCHHCCCCEEEEECCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHCCCEEEE EGADEANATVSRKHAHIRADGADYRLCDDGSEFGTRVFREGRSIEVPAGDRRGEKLRAGD CCCCCCCCHHHHCCEEEEECCCCEEEECCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCC EIYLGRACLRFERG EEEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA