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The map label for this gene is flhF [H]

Identifier: 116626503

GI number: 116626503

Start: 9356136

End: 9357305

Strand: Direct

Name: flhF [H]

Synonym: Acid_7466

Alternate gene names: 116626503

Gene position: 9356136-9357305 (Clockwise)

Preceding gene: 116626502

Following gene: 116626504

Centisome position: 93.88

GC content: 65.56

Gene sequence:

>1170_bases
ATGAAAATCAAATCCTACTATGCACGCACCGTAGAAGACGCCATGGCCGCTGCACGCCAGGAGATGGGCAGCGAGGCAAT
GCTGGTGAACAGCCGCAAGACACCCGTGGAAGCCAGGCACCTGGGCGAGTACGAAGTCGTATTCGCGACAATGGGCGGAG
CGGGCGCGGCCACGGAGGCTGCGCTTTCCCTGCCCGGCGAATCGATGGGGCTGACGCCGGCAGCGCCGCCGGCCGACCGG
CTATCGACAGAAGTAGCGGAGTTGAAGCGCGAGCTGGAAGGCATGCGGCGGGCCATCACGCGCACGGTATGCGCTCCGGC
GCAGTGGGTGGGTGTCTCCCAGGACGTCTCGGACGCTTACGCAGCGCTTACCGCCGCCGACGTCTCGGCCGAACTCGCCC
GCGAGGTGGTGCAGGCTGCGGGAAACCGCCTGAACGGCCAACGCGCGCCGGTCAATCGCACACCGCAGAGAATCGACGGC
GCGGCCTTCGAGCGGGCGCTCGCGGAGGAGTTTTCCAGCCGTTTCACGGTTGACGCGACCTTGGGGCGCGGCCCGGCGGA
GCCGCACATCGCGGCGCTGGTTGGGCCGCCCGGCTCCGGCAAGACGACCACGCTCGTCAAACTCGCGATCCACTTTGGGC
TGGCCGCACGGCGCCCGGTGCTGCTGCTTTCCATGGACACTTACCGGGTGGCAGCCGCCGAACAACTGCGGTCGTACGCG
GCAATCCTCGGGGTGGGATTCCAGGTTCTGGAAACGGTGAATTCGCTGGCGCAGGCGATCGAGGAAAACCGCGGCAAGGA
ACTGATCCTCATCGACACGCCGGGGCTCGGCCTCGGGGAACTGGAGGATTCGGCGAGCTTTGGTCATTTCCTATCCACGC
GCTCCGATATCGATACGCACCTGGTCCTATCGGCATCGATGAAACCTGCCGATCTATCACGCATGGTGGACGCCTTCGGA
GTCCTTCGCCCGCAGCACCTGTTATTCACCAGGCTCGATGAGACCGGCTCCTACGGGCAGATCTTCAGCGAAGCGGCGCG
AACCGGCAAACCGCTTTCCTTCTTCACGCATGGACAGCGCATTCCGGAGGACCTCGAAGCGGCCAGTAGCGAACGCCTGC
TGGACCTGGTGCTGGCTGGACGCAGCAGCAAGGCCAGGTCGGCGGCGTAG

Upstream 100 bases:

>100_bases
TCACTAGGCAATATTCAGTAGCAGTCGCCCTACAGAGAATCGTCGGACCCGCCGATAGATGCGGGAGAGACGACCCTGTG
TGGACCGGTGAGCGACCGCG

Downstream 100 bases:

>100_bases
GAAGAGAGTTGGCGATGAGTGGAAGCGTATGTATGGCTACTCGGTATCCGGTGAGATGAGGGAAGACGAGCGAGAGCGCC
TGATTCTGGAGCATTTGCCG

Product: GTP-binding signal recognition particle

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKIKSYYARTVEDAMAAARQEMGSEAMLVNSRKTPVEARHLGEYEVVFATMGGAGAATEAALSLPGESMGLTPAAPPADR
LSTEVAELKRELEGMRRAITRTVCAPAQWVGVSQDVSDAYAALTAADVSAELAREVVQAAGNRLNGQRAPVNRTPQRIDG
AAFERALAEEFSSRFTVDATLGRGPAEPHIAALVGPPGSGKTTTLVKLAIHFGLAARRPVLLLSMDTYRVAAAEQLRSYA
AILGVGFQVLETVNSLAQAIEENRGKELILIDTPGLGLGELEDSASFGHFLSTRSDIDTHLVLSASMKPADLSRMVDAFG
VLRPQHLLFTRLDETGSYGQIFSEAARTGKPLSFFTHGQRIPEDLEAASSERLLDLVLAGRSSKARSAA

Sequences:

>Translated_389_residues
MKIKSYYARTVEDAMAAARQEMGSEAMLVNSRKTPVEARHLGEYEVVFATMGGAGAATEAALSLPGESMGLTPAAPPADR
LSTEVAELKRELEGMRRAITRTVCAPAQWVGVSQDVSDAYAALTAADVSAELAREVVQAAGNRLNGQRAPVNRTPQRIDG
AAFERALAEEFSSRFTVDATLGRGPAEPHIAALVGPPGSGKTTTLVKLAIHFGLAARRPVLLLSMDTYRVAAAEQLRSYA
AILGVGFQVLETVNSLAQAIEENRGKELILIDTPGLGLGELEDSASFGHFLSTRSDIDTHLVLSASMKPADLSRMVDAFG
VLRPQHLLFTRLDETGSYGQIFSEAARTGKPLSFFTHGQRIPEDLEAASSERLLDLVLAGRSSKARSAA
>Mature_389_residues
MKIKSYYARTVEDAMAAARQEMGSEAMLVNSRKTPVEARHLGEYEVVFATMGGAGAATEAALSLPGESMGLTPAAPPADR
LSTEVAELKRELEGMRRAITRTVCAPAQWVGVSQDVSDAYAALTAADVSAELAREVVQAAGNRLNGQRAPVNRTPQRIDG
AAFERALAEEFSSRFTVDATLGRGPAEPHIAALVGPPGSGKTTTLVKLAIHFGLAARRPVLLLSMDTYRVAAAEQLRSYA
AILGVGFQVLETVNSLAQAIEENRGKELILIDTPGLGLGELEDSASFGHFLSTRSDIDTHLVLSASMKPADLSRMVDAFG
VLRPQHLLFTRLDETGSYGQIFSEAARTGKPLSFFTHGQRIPEDLEAASSERLLDLVLAGRSSKARSAA

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1788963, Length=281, Percent_Identity=26.6903914590747, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 41432; Mature: 41432

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKSYYARTVEDAMAAARQEMGSEAMLVNSRKTPVEARHLGEYEVVFATMGGAGAATEA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCEEEEEEECCCCCCHHHH
ALSLPGESMGLTPAAPPADRLSTEVAELKRELEGMRRAITRTVCAPAQWVGVSQDVSDAY
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHH
AALTAADVSAELAREVVQAAGNRLNGQRAPVNRTPQRIDGAAFERALAEEFSSRFTVDAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
LGRGPAEPHIAALVGPPGSGKTTTLVKLAIHFGLAARRPVLLLSMDTYRVAAAEQLRSYA
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
AILGVGFQVLETVNSLAQAIEENRGKELILIDTPGLGLGELEDSASFGHFLSTRSDIDTH
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEE
LVLSASMKPADLSRMVDAFGVLRPQHLLFTRLDETGSYGQIFSEAARTGKPLSFFTHGQR
EEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHCCCC
IPEDLEAASSERLLDLVLAGRSSKARSAA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKIKSYYARTVEDAMAAARQEMGSEAMLVNSRKTPVEARHLGEYEVVFATMGGAGAATEA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCEEEEEEECCCCCCHHHH
ALSLPGESMGLTPAAPPADRLSTEVAELKRELEGMRRAITRTVCAPAQWVGVSQDVSDAY
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHH
AALTAADVSAELAREVVQAAGNRLNGQRAPVNRTPQRIDGAAFERALAEEFSSRFTVDAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
LGRGPAEPHIAALVGPPGSGKTTTLVKLAIHFGLAARRPVLLLSMDTYRVAAAEQLRSYA
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
AILGVGFQVLETVNSLAQAIEENRGKELILIDTPGLGLGELEDSASFGHFLSTRSDIDTH
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEE
LVLSASMKPADLSRMVDAFGVLRPQHLLFTRLDETGSYGQIFSEAARTGKPLSFFTHGQR
EEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHCCCC
IPEDLEAASSERLLDLVLAGRSSKARSAA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]