| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116626040
Identifier: 116626040
GI number: 116626040
Start: 8791884
End: 8793107
Strand: Direct
Name: 116626040
Synonym: Acid_6998
Alternate gene names: NA
Gene position: 8791884-8793107 (Clockwise)
Preceding gene: 116626039
Following gene: 116626041
Centisome position: 88.22
GC content: 66.58
Gene sequence:
>1224_bases GTGAGCCTGACCCGCGACGGCCGCCTCCTCTTCTGTACGCGATTCCTCCGCCTCTTCTCCTACGGCGCCCTCTCCGTGGT GCTCGTCTTCTATCTCACGGGCCTCGGCCTGAGCCAGCAGCAGACCGGACTCCTCTTCACCCTGACCCTGCTCGGCGACA CCGCGATTTCCCTCGCCCTGACCACCCAGGCCGATCGCATCGGCCGCCGCAAAATGCTCATCGCAGGTGCAGCCCTCATG GCCGGCGCAGGCCTCGCCTTCGCCCTCACCCGCAACCCGCTGCTCCTCGTCATCGCCGGCACGATCGGGGTCATCAGCCC GAGCGGCAATGAGGTCGGCCCTTTTCTCCCCATCGAGCAGGCCGCGCTTTCGCAGGTCATCCCAAGCCGCGACCGCACCT CTGTCTTCGCCTGGTACGCGCTAACCGGCGCCGTCGCCACCGCCGCCGGATCGCTCTTCGCCGGCTTCTTCACCCAATCG CTCCAAAGCGCCCGCATGACGCCGATCGCCAGCCAGCGCGCCATCCTTTACCTTTATGCGGCGATGGGTTTGCTCCTCGG CATCCTCTTCACGCGCCTGTCCGCCACCTCGGAAATCGCGCGCGATCCCGACCGTCCCGCGATCGCCACCCTGCTGGGAA TCGGCGCGTCGCGGCCCGTCGTCCTTCGCCTCTCGGCGCTATTCGCGCTCGACGCTTTCGGCGGAGGCTTCGTCGTGCAA AGCTTCGCCGCCTGGTGGTTCTACCTGCGCTTCGGCGTGCAGCCCGCCACGCTAGGCGGAATCTTCTTCGGCGCCAACCT CTTCGCCGGAATCTCCGCCCTGCTCGCTTCCCGGATTGCAGCGCGCATCGGCCTGGTGCGCACCATGGTCTTCACCCACC TGCCCTCGAACATCCTGCTGATCCTCGTCCCTCTGATGCCGACGTTGCCGCTCGCTATCCTGGTCCTGCTCCTGCGCTTC AGTATCAGTCAGATGGATGTGCCAACGCGCCAGTCCTACACCATGGCTGTCGTGGCCCCCGAGGAGCGCTCCGCCGCTGC CGGCATCACCGGTGTCGCGCGCACCACCGGCGCCGCCTTCGCCCCGCTTTTCGCAGGGCTCCTGTTCGCCCATCCCGCCA CCATCAGCGTGCCCTTTTTCCTCGCGGGCACCCTCAAAATCCTCTACGACATCCTCCTCTATCGCGCCTTCGTTAACCTT CCGCCTATGGACGGGCTCCGTTAA
Upstream 100 bases:
>100_bases ACCCATCGGACTGGACCCAGGGCTGCATCGCCGTCAGCAACGAAGAGATGGACGAAATCTGGAGCCTCGTCCCCGATGGC ACCCCGATCGAGATTCTCCC
Downstream 100 bases:
>100_bases ACGCGTTACCATGAAGTTTCCGCAGGGACTCCAGGTTGACGAATTACATCACCAGACTTTTCCCTATCGTGCTGCTTGCT TGCAACGTCGGGGCCGCCAT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Protein; Transporter Facilitator Family; Multidrug Efflux Permease; ABC Transporter Permease Protein; Sugar Transporter Related Protein; Transport Transmembrane Protein
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSLTRDGRLLFCTRFLRLFSYGALSVVLVFYLTGLGLSQQQTGLLFTLTLLGDTAISLALTTQADRIGRRKMLIAGAALM AGAGLAFALTRNPLLLVIAGTIGVISPSGNEVGPFLPIEQAALSQVIPSRDRTSVFAWYALTGAVATAAGSLFAGFFTQS LQSARMTPIASQRAILYLYAAMGLLLGILFTRLSATSEIARDPDRPAIATLLGIGASRPVVLRLSALFALDAFGGGFVVQ SFAAWWFYLRFGVQPATLGGIFFGANLFAGISALLASRIAARIGLVRTMVFTHLPSNILLILVPLMPTLPLAILVLLLRF SISQMDVPTRQSYTMAVVAPEERSAAAGITGVARTTGAAFAPLFAGLLFAHPATISVPFFLAGTLKILYDILLYRAFVNL PPMDGLR
Sequences:
>Translated_407_residues MSLTRDGRLLFCTRFLRLFSYGALSVVLVFYLTGLGLSQQQTGLLFTLTLLGDTAISLALTTQADRIGRRKMLIAGAALM AGAGLAFALTRNPLLLVIAGTIGVISPSGNEVGPFLPIEQAALSQVIPSRDRTSVFAWYALTGAVATAAGSLFAGFFTQS LQSARMTPIASQRAILYLYAAMGLLLGILFTRLSATSEIARDPDRPAIATLLGIGASRPVVLRLSALFALDAFGGGFVVQ SFAAWWFYLRFGVQPATLGGIFFGANLFAGISALLASRIAARIGLVRTMVFTHLPSNILLILVPLMPTLPLAILVLLLRF SISQMDVPTRQSYTMAVVAPEERSAAAGITGVARTTGAAFAPLFAGLLFAHPATISVPFFLAGTLKILYDILLYRAFVNL PPMDGLR >Mature_406_residues SLTRDGRLLFCTRFLRLFSYGALSVVLVFYLTGLGLSQQQTGLLFTLTLLGDTAISLALTTQADRIGRRKMLIAGAALMA GAGLAFALTRNPLLLVIAGTIGVISPSGNEVGPFLPIEQAALSQVIPSRDRTSVFAWYALTGAVATAAGSLFAGFFTQSL QSARMTPIASQRAILYLYAAMGLLLGILFTRLSATSEIARDPDRPAIATLLGIGASRPVVLRLSALFALDAFGGGFVVQS FAAWWFYLRFGVQPATLGGIFFGANLFAGISALLASRIAARIGLVRTMVFTHLPSNILLILVPLMPTLPLAILVLLLRFS ISQMDVPTRQSYTMAVVAPEERSAAAGITGVARTTGAAFAPLFAGLLFAHPATISVPFFLAGTLKILYDILLYRAFVNLP PMDGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322584, Length=424, Percent_Identity=30.188679245283, Blast_Score=197, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43239; Mature: 43108
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTRDGRLLFCTRFLRLFSYGALSVVLVFYLTGLGLSQQQTGLLFTLTLLGDTAISLAL CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEE TTQADRIGRRKMLIAGAALMAGAGLAFALTRNPLLLVIAGTIGVISPSGNEVGPFLPIEQ ECCHHHHCCHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEECCCCCCCCCCCCHHH AALSQVIPSRDRTSVFAWYALTGAVATAAGSLFAGFFTQSLQSARMTPIASQRAILYLYA HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AMGLLLGILFTRLSATSEIARDPDRPAIATLLGIGASRPVVLRLSALFALDAFGGGFVVQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH SFAAWWFYLRFGVQPATLGGIFFGANLFAGISALLASRIAARIGLVRTMVFTHLPSNILL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ILVPLMPTLPLAILVLLLRFSISQMDVPTRQSYTMAVVAPEERSAAAGITGVARTTGAAF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHCCCCHHHHHCCHHH APLFAGLLFAHPATISVPFFLAGTLKILYDILLYRAFVNLPPMDGLR HHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLTRDGRLLFCTRFLRLFSYGALSVVLVFYLTGLGLSQQQTGLLFTLTLLGDTAISLAL CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEE TTQADRIGRRKMLIAGAALMAGAGLAFALTRNPLLLVIAGTIGVISPSGNEVGPFLPIEQ ECCHHHHCCHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEECCCCCCCCCCCCHHH AALSQVIPSRDRTSVFAWYALTGAVATAAGSLFAGFFTQSLQSARMTPIASQRAILYLYA HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AMGLLLGILFTRLSATSEIARDPDRPAIATLLGIGASRPVVLRLSALFALDAFGGGFVVQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH SFAAWWFYLRFGVQPATLGGIFFGANLFAGISALLASRIAARIGLVRTMVFTHLPSNILL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ILVPLMPTLPLAILVLLLRFSISQMDVPTRQSYTMAVVAPEERSAAAGITGVARTTGAAF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHCCCCHHHHHCCHHH APLFAGLLFAHPATISVPFFLAGTLKILYDILLYRAFVNLPPMDGLR HHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA