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The map label for this gene is yafK [C]

Identifier: 116626039

GI number: 116626039

Start: 8791465

End: 8791887

Strand: Direct

Name: yafK [C]

Synonym: Acid_6997

Alternate gene names: 116626039

Gene position: 8791465-8791887 (Clockwise)

Preceding gene: 116626034

Following gene: 116626040

Centisome position: 88.22

GC content: 63.83

Gene sequence:

>423_bases
GTGCCTTGCGGGGTCCTCCGGGTCAACCAGATCGTCGTTTACAAATCGCGCCGTGAAATGCTGCTCCTGCGCGGCGAAAG
CATCCTCCGCTCCTACCGCATAGCCCTGGGCCGCGACCCCATCGGCCACAAATTCCAGGAGGGCGACGGCCGCACTCCCG
AAGGCTGCTACACCATCGACCGCCGCAATCCAAAGAGCAAGTATCACCTCTCCCTTCACATCTCTTACCCCGAAGCCCGG
GATCTCGACCGCGCCCGTGAGGCCGGCGTCGATCCCGGCGGCGACATCATGATCCACGGCCTCAAAGACGGGCAGCCCGA
CCCATCGGACTGGACCCAGGGCTGCATCGCCGTCAGCAACGAAGAGATGGACGAAATCTGGAGCCTCGTCCCCGATGGCA
CCCCGATCGAGATTCTCCCGTGA

Upstream 100 bases:

>100_bases
CGAAGCCTGATAGTACTTCGGTGCCCTGACTGAAAAACCTTCTCTCGCCAAGCCGCAAAGACCGCCAAGAAAACCTAAAA
GACCCCAATACAATAGGAGG

Downstream 100 bases:

>100_bases
GCCTGACCCGCGACGGCCGCCTCCTCTTCTGTACGCGATTCCTCCGCCTCTTCTCCTACGGCGCCCTCTCCGTGGTGCTC
GTCTTCTATCTCACGGGCCT

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPCGVLRVNQIVVYKSRREMLLLRGESILRSYRIALGRDPIGHKFQEGDGRTPEGCYTIDRRNPKSKYHLSLHISYPEAR
DLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEMDEIWSLVPDGTPIEILP

Sequences:

>Translated_140_residues
MPCGVLRVNQIVVYKSRREMLLLRGESILRSYRIALGRDPIGHKFQEGDGRTPEGCYTIDRRNPKSKYHLSLHISYPEAR
DLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEMDEIWSLVPDGTPIEILP
>Mature_139_residues
PCGVLRVNQIVVYKSRREMLLLRGESILRSYRIALGRDPIGHKFQEGDGRTPEGCYTIDRRNPKSKYHLSLHISYPEARD
LDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEMDEIWSLVPDGTPIEILP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15755; Mature: 15624

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCGVLRVNQIVVYKSRREMLLLRGESILRSYRIALGRDPIGHKFQEGDGRTPEGCYTID
CCCCEEEEEEEEEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEC
RRNPKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSN
CCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECC
EEMDEIWSLVPDGTPIEILP
CCHHHHHHHCCCCCCEEECC
>Mature Secondary Structure 
PCGVLRVNQIVVYKSRREMLLLRGESILRSYRIALGRDPIGHKFQEGDGRTPEGCYTID
CCCEEEEEEEEEEECCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEC
RRNPKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSN
CCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECC
EEMDEIWSLVPDGTPIEILP
CCHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA