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The map label for this gene is 116626041

Identifier: 116626041

GI number: 116626041

Start: 8793368

End: 8794192

Strand: Direct

Name: 116626041

Synonym: Acid_6999

Alternate gene names: NA

Gene position: 8793368-8794192 (Clockwise)

Preceding gene: 116626040

Following gene: 116626042

Centisome position: 88.24

GC content: 57.09

Gene sequence:

>825_bases
ATGGCTGATCGCAGGGTCTTCATCAGTTATAGTCATGCGGACCGGAAGTGGCTGGAGCGCCTGCAGGTGCACCTTCGTCC
GCTCATTCGCGATTCGATCGCGGATATATGGGACGATACCCGAATCAAGCCCGGCGATTCCTGGCAGTTCGAGATTCGAA
AAGCTCTCGAGGCAGCGTCCGTCGCGGTCCTACTGATTAGCGCCGACTTTCTGGCCTCCGATTTTGTCCAATCCGAGGAG
TTGCCGGTGCTCCTGAAAGCAGCCGCCGAGCGAGGCCTTCTTATACTCCAGGTGATCGTAAGCCCCTCCCGCTTTGAACG
CACCCCGCTGGCGCAGCTTCAGGCTGTAAACTCTCCGGCCGAGCCGCTTGTCAATATGAATCAATACCAGCAGGAGCTCT
TGATGGAAACGCTGGCGGCAAGAATCGAATCGGCGGTCCAGACGGACGATATGCGGGCGCAAATCAATTCGGCGCACGAT
CGTATCGATAGCCAGGCGTCTCAGATCGATACGCTGATCACATACTTCATGTCCTCGTCGATCTTCAACCACCTCTGCGG
AATCGCGCTGCTTCACGAGTACACGTACCATCACGATCCTGGCAATCAGCGTGAGTTCTATTTCCTGCGGGACGCAGGGC
TCATAAAACCCAAGCCGGGCGTTTCCTTCCTGGACTTCGGCGATAGCCTCCCTTGGAATGTTGCCGCGGTGGCGGAGCCA
ACTCCCATCGGATGGATGTACGTGAAACTGCGACGGAAGGACATTCCGCCAAACATGCTCGAAGATACCAGGAACCTGCG
TGTTGACCCCGCGGCCCTCGCATAA

Upstream 100 bases:

>100_bases
CATCGGCGCCATCACCTTCTAGATCGAAGTCTTCTAGATCGAAGCCTGCCTACCGGCTGTGCCTCTGCGATACTGTGAGG
ACGACGATTGGGAAGGCAAA

Downstream 100 bases:

>100_bases
GCCGCCAGGAGTGATACACTCCACGTGGATTCACATGCTGAAGTTCCTCGCGTTCGCGGTTCTGTTCGCACCCACGGCAG
CGGCTCAGAAGTCGCCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Miro Domain-Containing Protein; NACHT Domain Family; Leucine-Rich Repeat-Containing Protein; Ll-Interleukin Receptor; WD-Repeat Protein; Transmembrane Receptor Activity; WD Repeat-Containing Protein

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MADRRVFISYSHADRKWLERLQVHLRPLIRDSIADIWDDTRIKPGDSWQFEIRKALEAASVAVLLISADFLASDFVQSEE
LPVLLKAAAERGLLILQVIVSPSRFERTPLAQLQAVNSPAEPLVNMNQYQQELLMETLAARIESAVQTDDMRAQINSAHD
RIDSQASQIDTLITYFMSSSIFNHLCGIALLHEYTYHHDPGNQREFYFLRDAGLIKPKPGVSFLDFGDSLPWNVAAVAEP
TPIGWMYVKLRRKDIPPNMLEDTRNLRVDPAALA

Sequences:

>Translated_274_residues
MADRRVFISYSHADRKWLERLQVHLRPLIRDSIADIWDDTRIKPGDSWQFEIRKALEAASVAVLLISADFLASDFVQSEE
LPVLLKAAAERGLLILQVIVSPSRFERTPLAQLQAVNSPAEPLVNMNQYQQELLMETLAARIESAVQTDDMRAQINSAHD
RIDSQASQIDTLITYFMSSSIFNHLCGIALLHEYTYHHDPGNQREFYFLRDAGLIKPKPGVSFLDFGDSLPWNVAAVAEP
TPIGWMYVKLRRKDIPPNMLEDTRNLRVDPAALA
>Mature_273_residues
ADRRVFISYSHADRKWLERLQVHLRPLIRDSIADIWDDTRIKPGDSWQFEIRKALEAASVAVLLISADFLASDFVQSEEL
PVLLKAAAERGLLILQVIVSPSRFERTPLAQLQAVNSPAEPLVNMNQYQQELLMETLAARIESAVQTDDMRAQINSAHDR
IDSQASQIDTLITYFMSSSIFNHLCGIALLHEYTYHHDPGNQREFYFLRDAGLIKPKPGVSFLDFGDSLPWNVAAVAEPT
PIGWMYVKLRRKDIPPNMLEDTRNLRVDPAALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31096; Mature: 30965

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRRVFISYSHADRKWLERLQVHLRPLIRDSIADIWDDTRIKPGDSWQFEIRKALEAAS
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VAVLLISADFLASDFVQSEELPVLLKAAAERGLLILQVIVSPSRFERTPLAQLQAVNSPA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEHHCCHHHCCCHHHHHHHCCCCH
EPLVNMNQYQQELLMETLAARIESAVQTDDMRAQINSAHDRIDSQASQIDTLITYFMSSS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFNHLCGIALLHEYTYHHDPGNQREFYFLRDAGLIKPKPGVSFLDFGDSLPWNVAAVAEP
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCCEEEECCC
TPIGWMYVKLRRKDIPPNMLEDTRNLRVDPAALA
CCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHCC
>Mature Secondary Structure 
ADRRVFISYSHADRKWLERLQVHLRPLIRDSIADIWDDTRIKPGDSWQFEIRKALEAAS
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VAVLLISADFLASDFVQSEELPVLLKAAAERGLLILQVIVSPSRFERTPLAQLQAVNSPA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEHHCCHHHCCCHHHHHHHCCCCH
EPLVNMNQYQQELLMETLAARIESAVQTDDMRAQINSAHDRIDSQASQIDTLITYFMSSS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFNHLCGIALLHEYTYHHDPGNQREFYFLRDAGLIKPKPGVSFLDFGDSLPWNVAAVAEP
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCCEEEECCC
TPIGWMYVKLRRKDIPPNMLEDTRNLRVDPAALA
CCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA