| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625017
Identifier: 116625017
GI number: 116625017
Start: 7456128
End: 7458179
Strand: Direct
Name: 116625017
Synonym: Acid_5947
Alternate gene names: NA
Gene position: 7456128-7458179 (Clockwise)
Preceding gene: 116625015
Following gene: 116625018
Centisome position: 74.82
GC content: 66.67
Gene sequence:
>2052_bases ATGTCATCGCGATCCCGGGCAAAGGGCGCAGGTCCGCTCAGCGATGAACCGATTTCCGCGCCAACCTCCGCTCCGAGCCA CATCGCGCCGTGGCGCACCCATGCGCGCCGCCTGCTCCTGCCCTGGACGCTGGCCCTGCTGGCCTACCTCAACTCCTTCG GCGCCGGCTTCGTCTACGATAACCGCGTTGCCATCCTCGATGACTCCCGCGTCCACGCCCTCACCGCCGCCAATCTCCAC GCCATCTGGACGCAGGATACGTGGGGCGACGGCGCCACCTCGGGCAATTACCGGCCCTTGACTAACTCCACTTATCTGCT CAACTACGCCATTCTTGGCAATGGCACCAGCCCTTTCGGCTATCACTGCTTCAACTTACTTCTCCATCTCGCCAACATCC TCCTCCTCTACCTTTGCTGCCTCCATCTCTTCAATCACCGCGATCCCAAGGGCGATCCTGCCGGCGCCCTCGCCCTCGCC GCCGCCGCGTTGTTTAGCGTGCACCCCCTCCTCACTGAGACCGTCACCAACATCGTCGGACGAGCGGACATGCTCGCCGC CTTTGGCATCCTCGCCGGATTGCTCTGCCACATTCGCGCCGGCTCCGCTACGGGCCGCTCCCGAACGCTCTGGCTCACCG GCGTATCCGCCGCCGTCGCCATCGGAATTTTCTCCAAGGAGAATGCAGTCGTGGTGCTGGCCGCCATGCTGCTCTACGAC CTCGGCTATCGACCCAAAGCCTGGCGTTCCTCGCTGGCCGGCTACGTGGCCGCCTGCGTCCCGCTCGCCGCCTTCTTCGT TCTCCGCTACGTCTTCCTCTCCCCGCTTATGGACCGCCTCCCCGATATGGGCGACAACCCCCTCCTTAGCGCCGATTTCC TCACCGGCCGCGCCACCGCGTTGCTCGTCCTCGGCAAGTATCTCTGGCTCCTGGTTTTTCCCGTCGCGCTCTCCCCCGAC TACTCCTACAACCAAATCCCGCTCGCCTCCTGGACCAGTCCAGCCGTCCTCGCGCCGCTCGCCATCTGCATCGCCATAGC CGCGCTCACGCTCGCGGCGTTCCGCACCCGCAAGCACGTCTTCTTCTTTGCCGCCTTTTTCCTGGTGGCGCTCGCTCCCG TCGCCAACATCTTCATTCTCATTGGCACCATCATGGGCGAGCGCCTGCTCTACCTCCCGGTGATGGCCTTCGCCGCCTGC CTCGCCGTCGCCATCCACCGCTTCGCCCGACACCGCTACGCCCTGCCGGCGGCTGTGGGAGTGTTTTGCACTCTCTACGC CGCCCGCACGTTTGCTCGCAACCGCGACTGGCACGACGAAATCAGCCTCTGGTCTTCCGCCGCCCAGGTCAGCCCCGGAA GCTACCGCGTCCACGACCGCCTCGCGTACTACCTCACGCTGCAATCGCCGCCGGACGCGTCTGCCATCCAGCGCGAAACC GACCGCACCGTCGCCATCCTCGACACCCTCGCGCCCCGGGACGCCGAGCCCAATCCCTACATCAACGCCGCTGCCTGGTA TCGCAACCACGGTGACCCGCACCGCGCCCTCGCCCTGCTCCAACGCGCCGCGTCCATCGTCGAAGCCAAATCCGCCGAGC TGGTCCGCCTCAACCGCGCGCACCACAAAAGCGCGGTCGCCACCGGCGACCCCCTCCTCCACGCCGAGCTCGCCCGCACC TATTCCGCTCTCGGCGATCGTCCCGCTGCCGCCGCCGAATTCCAGCTGGCCCGCCAGCTCCGGCCCGATCCCGCCTACTC CTCCGAACTCGCCGCCGAATACCTGGCCGCCGGCGATTGGCGTGCCGCCGCCCTCGCGCTCCTCGAAGGCCTCCTGCTCG ATCCCGACCAGACCGCGCTCGCCGCCCCATACGCCGAGTTCTACCGCCAGAATGACCCCACCAGCTGCGCGATCTCCAAT GGCGCCCTCAACACCAACTGCCCTGCCGTCCACGAACAGCTCTGCCAAGCCTCCCGCACTGTCGTCCAGATCGATCTCGC TCTCGGCCGAACTGCGCAAGCCGCCTCCGTTCGCGCCCTCTGCCGGGAATAA
Upstream 100 bases:
>100_bases GCGGCGATCACACGGAAGCTCTCGCGAAGGTTGTTTGCGACGTATTCGAAGTCGGCCAAATTCCAGTATCCAACACCCCG GCCCCTGCTAAAATCTGTGA
Downstream 100 bases:
>100_bases TTTCTCGCAAAGGCGCAAAGGCCGCAAAGAAAATCAAGCAGGCCCTGATTTCTGTGCTGCCTTTCTTTGCGCTCTTTGCG CCTTTGCGAGACATGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 683; Mature: 682
Protein sequence:
>683_residues MSSRSRAKGAGPLSDEPISAPTSAPSHIAPWRTHARRLLLPWTLALLAYLNSFGAGFVYDNRVAILDDSRVHALTAANLH AIWTQDTWGDGATSGNYRPLTNSTYLLNYAILGNGTSPFGYHCFNLLLHLANILLLYLCCLHLFNHRDPKGDPAGALALA AAALFSVHPLLTETVTNIVGRADMLAAFGILAGLLCHIRAGSATGRSRTLWLTGVSAAVAIGIFSKENAVVVLAAMLLYD LGYRPKAWRSSLAGYVAACVPLAAFFVLRYVFLSPLMDRLPDMGDNPLLSADFLTGRATALLVLGKYLWLLVFPVALSPD YSYNQIPLASWTSPAVLAPLAICIAIAALTLAAFRTRKHVFFFAAFFLVALAPVANIFILIGTIMGERLLYLPVMAFAAC LAVAIHRFARHRYALPAAVGVFCTLYAARTFARNRDWHDEISLWSSAAQVSPGSYRVHDRLAYYLTLQSPPDASAIQRET DRTVAILDTLAPRDAEPNPYINAAAWYRNHGDPHRALALLQRAASIVEAKSAELVRLNRAHHKSAVATGDPLLHAELART YSALGDRPAAAAEFQLARQLRPDPAYSSELAAEYLAAGDWRAAALALLEGLLLDPDQTALAAPYAEFYRQNDPTSCAISN GALNTNCPAVHEQLCQASRTVVQIDLALGRTAQAASVRALCRE
Sequences:
>Translated_683_residues MSSRSRAKGAGPLSDEPISAPTSAPSHIAPWRTHARRLLLPWTLALLAYLNSFGAGFVYDNRVAILDDSRVHALTAANLH AIWTQDTWGDGATSGNYRPLTNSTYLLNYAILGNGTSPFGYHCFNLLLHLANILLLYLCCLHLFNHRDPKGDPAGALALA AAALFSVHPLLTETVTNIVGRADMLAAFGILAGLLCHIRAGSATGRSRTLWLTGVSAAVAIGIFSKENAVVVLAAMLLYD LGYRPKAWRSSLAGYVAACVPLAAFFVLRYVFLSPLMDRLPDMGDNPLLSADFLTGRATALLVLGKYLWLLVFPVALSPD YSYNQIPLASWTSPAVLAPLAICIAIAALTLAAFRTRKHVFFFAAFFLVALAPVANIFILIGTIMGERLLYLPVMAFAAC LAVAIHRFARHRYALPAAVGVFCTLYAARTFARNRDWHDEISLWSSAAQVSPGSYRVHDRLAYYLTLQSPPDASAIQRET DRTVAILDTLAPRDAEPNPYINAAAWYRNHGDPHRALALLQRAASIVEAKSAELVRLNRAHHKSAVATGDPLLHAELART YSALGDRPAAAAEFQLARQLRPDPAYSSELAAEYLAAGDWRAAALALLEGLLLDPDQTALAAPYAEFYRQNDPTSCAISN GALNTNCPAVHEQLCQASRTVVQIDLALGRTAQAASVRALCRE >Mature_682_residues SSRSRAKGAGPLSDEPISAPTSAPSHIAPWRTHARRLLLPWTLALLAYLNSFGAGFVYDNRVAILDDSRVHALTAANLHA IWTQDTWGDGATSGNYRPLTNSTYLLNYAILGNGTSPFGYHCFNLLLHLANILLLYLCCLHLFNHRDPKGDPAGALALAA AALFSVHPLLTETVTNIVGRADMLAAFGILAGLLCHIRAGSATGRSRTLWLTGVSAAVAIGIFSKENAVVVLAAMLLYDL GYRPKAWRSSLAGYVAACVPLAAFFVLRYVFLSPLMDRLPDMGDNPLLSADFLTGRATALLVLGKYLWLLVFPVALSPDY SYNQIPLASWTSPAVLAPLAICIAIAALTLAAFRTRKHVFFFAAFFLVALAPVANIFILIGTIMGERLLYLPVMAFAACL AVAIHRFARHRYALPAAVGVFCTLYAARTFARNRDWHDEISLWSSAAQVSPGSYRVHDRLAYYLTLQSPPDASAIQRETD RTVAILDTLAPRDAEPNPYINAAAWYRNHGDPHRALALLQRAASIVEAKSAELVRLNRAHHKSAVATGDPLLHAELARTY SALGDRPAAAAEFQLARQLRPDPAYSSELAAEYLAAGDWRAAALALLEGLLLDPDQTALAAPYAEFYRQNDPTSCAISNG ALNTNCPAVHEQLCQASRTVVQIDLALGRTAQAASVRALCRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI224809432, Length=462, Percent_Identity=27.4891774891775, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI301336134, Length=593, Percent_Identity=26.8128161888702, Blast_Score=114, Evalue=4e-25, Organism=Homo sapiens, GI118766330, Length=463, Percent_Identity=28.7257019438445, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI118766328, Length=463, Percent_Identity=28.7257019438445, Blast_Score=113, Evalue=6e-25, Organism=Homo sapiens, GI22749211, Length=304, Percent_Identity=33.5526315789474, Blast_Score=93, Evalue=8e-19, Organism=Caenorhabditis elegans, GI25147174, Length=432, Percent_Identity=27.3148148148148, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17560436, Length=454, Percent_Identity=27.7533039647577, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI24647123, Length=438, Percent_Identity=28.9954337899543, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI24656717, Length=489, Percent_Identity=25.7668711656442, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI18110006, Length=489, Percent_Identity=25.7668711656442, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI19920486, Length=296, Percent_Identity=31.7567567567568, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI161076610, Length=296, Percent_Identity=31.7567567567568, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI281364285, Length=160, Percent_Identity=38.75, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24581187, Length=160, Percent_Identity=38.75, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73888; Mature: 73757
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRSRAKGAGPLSDEPISAPTSAPSHIAPWRTHARRLLLPWTLALLAYLNSFGAGFVYD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC NRVAILDDSRVHALTAANLHAIWTQDTWGDGATSGNYRPLTNSTYLLNYAILGNGTSPFG CEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHH YHCFNLLLHLANILLLYLCCLHLFNHRDPKGDPAGALALAAAALFSVHPLLTETVTNIVG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RADMLAAFGILAGLLCHIRAGSATGRSRTLWLTGVSAAVAIGIFSKENAVVVLAAMLLYD HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHEEEECCCCHHHHHHHHHHHH LGYRPKAWRSSLAGYVAACVPLAAFFVLRYVFLSPLMDRLPDMGDNPLLSADFLTGRATA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCHHHH LLVLGKYLWLLVFPVALSPDYSYNQIPLASWTSPAVLAPLAICIAIAALTLAAFRTRKHV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FFFAAFFLVALAPVANIFILIGTIMGERLLYLPVMAFAACLAVAIHRFARHRYALPAAVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFCTLYAARTFARNRDWHDEISLWSSAAQVSPGSYRVHDRLAYYLTLQSPPDASAIQRET HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHCCEEEEEEEECCCCCHHHHHHHC DRTVAILDTLAPRDAEPNPYINAAAWYRNHGDPHRALALLQRAASIVEAKSAELVRLNRA CCEEEEHHHHCCCCCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH HHKSAVATGDPLLHAELARTYSALGDRPAAAAEFQLARQLRPDPAYSSELAAEYLAAGDW HHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCH RAAALALLEGLLLDPDQTALAAPYAEFYRQNDPTSCAISNGALNTNCPAVHEQLCQASRT HHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCC VVQIDLALGRTAQAASVRALCRE EEEEEHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SSRSRAKGAGPLSDEPISAPTSAPSHIAPWRTHARRLLLPWTLALLAYLNSFGAGFVYD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC NRVAILDDSRVHALTAANLHAIWTQDTWGDGATSGNYRPLTNSTYLLNYAILGNGTSPFG CEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHH YHCFNLLLHLANILLLYLCCLHLFNHRDPKGDPAGALALAAAALFSVHPLLTETVTNIVG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RADMLAAFGILAGLLCHIRAGSATGRSRTLWLTGVSAAVAIGIFSKENAVVVLAAMLLYD HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHEEEECCCCHHHHHHHHHHHH LGYRPKAWRSSLAGYVAACVPLAAFFVLRYVFLSPLMDRLPDMGDNPLLSADFLTGRATA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCHHHH LLVLGKYLWLLVFPVALSPDYSYNQIPLASWTSPAVLAPLAICIAIAALTLAAFRTRKHV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FFFAAFFLVALAPVANIFILIGTIMGERLLYLPVMAFAACLAVAIHRFARHRYALPAAVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFCTLYAARTFARNRDWHDEISLWSSAAQVSPGSYRVHDRLAYYLTLQSPPDASAIQRET HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHCCEEEEEEEECCCCCHHHHHHHC DRTVAILDTLAPRDAEPNPYINAAAWYRNHGDPHRALALLQRAASIVEAKSAELVRLNRA CCEEEEHHHHCCCCCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH HHKSAVATGDPLLHAELARTYSALGDRPAAAAEFQLARQLRPDPAYSSELAAEYLAAGDW HHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCH RAAALALLEGLLLDPDQTALAAPYAEFYRQNDPTSCAISNGALNTNCPAVHEQLCQASRT HHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCC VVQIDLALGRTAQAASVRALCRE EEEEEHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA