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The map label for this gene is yebC [C]

Identifier: 116625018

GI number: 116625018

Start: 7458463

End: 7459209

Strand: Direct

Name: yebC [C]

Synonym: Acid_5948

Alternate gene names: 116625018

Gene position: 7458463-7459209 (Clockwise)

Preceding gene: 116625017

Following gene: 116625019

Centisome position: 74.84

GC content: 59.84

Gene sequence:

>747_bases
ATGTCAGGCCACTCCAAATGGGCCACCATTAAGCACAAGAAGGCGGCGACCGACGCGAAGCGCGGCAGAGCGTTCACCCG
CCTCATCAAGGAAATCACGATCGCGGCCCGTAACGGCGGCGATCCCGACGGCAATCCCCGTTTGCGCTCCGCCATCCTCG
CAGCCAAGAACGTGTCCATGCCTTCCGACAACATCAAAAAGGCAATCATGCGCGGCACCGGTGAACTGGAGGGCGGCCAG
ATCGAAGAAGTCATGTTCGAAGGCTACGGCCCCGGCGGCGCAGCCGTTCTGGTCAATGTCGCAACCGACAACCGCAATCG
TACGGTCAGTGAAATCCGCCATGCGTTCTCCAAGAATGGCGGGAACATGGGCGAGCAGGGTAGCGTGGCGTGGATGTTCG
AGCGCCGCAGCCAGATCTTCGTTCCGATCGAAAAAGCGACGGAAGATCAGCTGATGGGCATCGTGCTCGATGCCGGCGGC
GACGATCTGCGCAACGACGGCGATCAATGGGAAGTTCTATCCGACCCGGCGAGCCACGACAGCGTGCTCAAGGCGTTGGA
GTCCAACGGCATCCCGGTGGTGGATCCGACGATTGCGTGGGTTCCCAAGAACCTGATGAAGCTGGAAGGCAAGAACGCAA
GCGGTATGCTCCGGCTCACCGAAGTTCTGGAAGACCACGACGATGTGCAGAGCGTCTATTCCAACTTCGACATCGATGAG
AAGGAGTTGGAGGCGCTGTCGCAGTAA

Upstream 100 bases:

>100_bases
GGTTGAAGCCCTATTCCCGATTCTGCTATCCTCAAAAGGTTGAATTCATAACAACATAGCTTTCCCGGCATGAATGCCGG
GCCTACCTCGAGAGGTTCAC

Downstream 100 bases:

>100_bases
GGTGCGCGTCCTGGGCGTCGATTGCGGTTCAGAACGTACTGGCTGGGGCGTGATCGATAGCGACGGAGGGTGCCACCGGA
TGGTTGCCGCGGGGGTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSGHSKWATIKHKKAATDAKRGRAFTRLIKEITIAARNGGDPDGNPRLRSAILAAKNVSMPSDNIKKAIMRGTGELEGGQ
IEEVMFEGYGPGGAAVLVNVATDNRNRTVSEIRHAFSKNGGNMGEQGSVAWMFERRSQIFVPIEKATEDQLMGIVLDAGG
DDLRNDGDQWEVLSDPASHDSVLKALESNGIPVVDPTIAWVPKNLMKLEGKNASGMLRLTEVLEDHDDVQSVYSNFDIDE
KELEALSQ

Sequences:

>Translated_248_residues
MSGHSKWATIKHKKAATDAKRGRAFTRLIKEITIAARNGGDPDGNPRLRSAILAAKNVSMPSDNIKKAIMRGTGELEGGQ
IEEVMFEGYGPGGAAVLVNVATDNRNRTVSEIRHAFSKNGGNMGEQGSVAWMFERRSQIFVPIEKATEDQLMGIVLDAGG
DDLRNDGDQWEVLSDPASHDSVLKALESNGIPVVDPTIAWVPKNLMKLEGKNASGMLRLTEVLEDHDDVQSVYSNFDIDE
KELEALSQ
>Mature_247_residues
SGHSKWATIKHKKAATDAKRGRAFTRLIKEITIAARNGGDPDGNPRLRSAILAAKNVSMPSDNIKKAIMRGTGELEGGQI
EEVMFEGYGPGGAAVLVNVATDNRNRTVSEIRHAFSKNGGNMGEQGSVAWMFERRSQIFVPIEKATEDQLMGIVLDAGGD
DLRNDGDQWEVLSDPASHDSVLKALESNGIPVVDPTIAWVPKNLMKLEGKNASGMLRLTEVLEDHDDVQSVYSNFDIDEK
ELEALSQ

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=250, Percent_Identity=26.8, Blast_Score=115, Evalue=5e-26,
Organism=Escherichia coli, GI1788171, Length=243, Percent_Identity=42.798353909465, Blast_Score=210, Evalue=8e-56,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=32.9113924050633, Blast_Score=108, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17556100, Length=248, Percent_Identity=24.1935483870968, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=31.5589353612167, Blast_Score=115, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5948_SOLUE (Q01TY1)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_827174.1
- ProteinModelPortal:   Q01TY1
- SMR:   Q01TY1
- STRING:   Q01TY1
- GeneID:   4425833
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_5948
- NMPDR:   fig|234267.9.peg.5659
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   TENINRT
- PhylomeDB:   Q01TY1
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27000; Mature: 26868

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATIKHKKAATDAKRGRAFTRLIKEITIAARNGGDPDGNPRLRSAILAAKNVSM
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PSDNIKKAIMRGTGELEGGQIEEVMFEGYGPGGAAVLVNVATDNRNRTVSEIRHAFSKNG
CHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
GNMGEQGSVAWMFERRSQIFVPIEKATEDQLMGIVLDAGGDDLRNDGDQWEVLSDPASHD
CCCCCCCCEEEEEECCCEEEEEHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCHH
SVLKALESNGIPVVDPTIAWVPKNLMKLEGKNASGMLRLTEVLEDHDDVQSVYSNFDIDE
HHHHHHHCCCCCEECCHHHHHCHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCH
KELEALSQ
HHHHHHCC
>Mature Secondary Structure 
SGHSKWATIKHKKAATDAKRGRAFTRLIKEITIAARNGGDPDGNPRLRSAILAAKNVSM
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PSDNIKKAIMRGTGELEGGQIEEVMFEGYGPGGAAVLVNVATDNRNRTVSEIRHAFSKNG
CHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCC
GNMGEQGSVAWMFERRSQIFVPIEKATEDQLMGIVLDAGGDDLRNDGDQWEVLSDPASHD
CCCCCCCCEEEEEECCCEEEEEHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCHH
SVLKALESNGIPVVDPTIAWVPKNLMKLEGKNASGMLRLTEVLEDHDDVQSVYSNFDIDE
HHHHHHHCCCCCEECCHHHHHCHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCH
KELEALSQ
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA