| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624580
Identifier: 116624580
GI number: 116624580
Start: 6898933
End: 6899982
Strand: Reverse
Name: 116624580
Synonym: Acid_5504
Alternate gene names: NA
Gene position: 6899982-6898933 (Counterclockwise)
Preceding gene: 116624581
Following gene: 116624574
Centisome position: 69.24
GC content: 61.14
Gene sequence:
>1050_bases ATGAAGAACATTGCGGTAGAGAATGCCAGGAAAACGAGCAGGCCCATGTGGCGATGGGCCGCGGTAGCTTGCGCGGCGGC CGCGCTGTTGCTGGTGCTGCCGTTGCTACCTGTGAAATCGACGGGGGTCCCGCTGCTGGCGCAATCCGTGCAGGCCATGG CGAATGTGCACACGGTGCACATCACGGGGCGCATCCGCACTCTGCCCCATGACAATTTCGAATTGATTGGCACGCAGTAT GATTTTGTGCCGATCGAAATCTGGCGCGAGTTCAGCACTCCGCCGCGCTGGCGCGTGGAAAAGCCCGGCCGCGTGGTGGT GATGGACGGGCAAAGCTCGGTGCTCTATTTCAAGACCACCAATGAAGCGGTGAAGGGTACGCCGAACGCCGGCTTTCTCG AATGGCTGCGGCCGCTGCTGGATCCGCAATCGATTCTGCAAAACGAATTGGCGGCGGCGCGCAGAGGGGAGGCGCGGGCA GCGGTCAGCGGGAGCACGGTGGCTATGCACCGGCAGGCGCGCGGGAATTTCGCCAACGATTGGGCGCGCAACAAGTCGAT CACGGAATCTGACCATACGGCGGTGTATCGGTTCGACCAGACCGGCAAACGGCTCGAAGGACTGCAAGTGCTGGTCGCCA ACGTGTTGGTGGCGGAGTTTACCGAGTTTCGGTATGACGAAGAGTTCCCGCCGTCGCTGTTTGTCTCACCGGTGCCTGCG AACGCGAGTTGGGAAACGGACGCCAAGCCGGCGAGCGTGAGTTTCACAGGGCCGAAGGAAGCCGTGGTGTACTTCTTCGA CGCGCTTGCGAAGGAAGACTGGGATGCGGTGCTACAGGTGATGCAGAGAAGCACCGTGCATCCGGGCGTCAAGAGCACCT ACGGGGGGCTGCAGGTGATTTCGATTGGCGAGGCGTTCCAATCCGGGCTGTATGCGGGATACTTTGTGCCTTACCAGGTG CGGCTGCGCGATGGGACAGTCAAGAGCCACAAGATCGCGATTCGAAATGATAATCCGGCGCACCAGTGGGTCGTGGATGG CGGCTACTGA
Upstream 100 bases:
>100_bases GAGATGCGCAATCATGACCGAACCCGAAGAACAGGAAATCCTCCAGCGTATCCGGCCCGCCAGGAGAATCGCAGCTTCCA ATTCATTTCGGGAGCGTGTG
Downstream 100 bases:
>100_bases TTCAAGGCCGGGCTCCTCTGGACCGGCTTAAGTGCTCCGATACCGCTTCACAGAGCCGATCGCGAGAAGAATCGCACCGG TCAGAAAACCGAACGCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKNIAVENARKTSRPMWRWAAVACAAAALLLVLPLLPVKSTGVPLLAQSVQAMANVHTVHITGRIRTLPHDNFELIGTQY DFVPIEIWREFSTPPRWRVEKPGRVVVMDGQSSVLYFKTTNEAVKGTPNAGFLEWLRPLLDPQSILQNELAAARRGEARA AVSGSTVAMHRQARGNFANDWARNKSITESDHTAVYRFDQTGKRLEGLQVLVANVLVAEFTEFRYDEEFPPSLFVSPVPA NASWETDAKPASVSFTGPKEAVVYFFDALAKEDWDAVLQVMQRSTVHPGVKSTYGGLQVISIGEAFQSGLYAGYFVPYQV RLRDGTVKSHKIAIRNDNPAHQWVVDGGY
Sequences:
>Translated_349_residues MKNIAVENARKTSRPMWRWAAVACAAAALLLVLPLLPVKSTGVPLLAQSVQAMANVHTVHITGRIRTLPHDNFELIGTQY DFVPIEIWREFSTPPRWRVEKPGRVVVMDGQSSVLYFKTTNEAVKGTPNAGFLEWLRPLLDPQSILQNELAAARRGEARA AVSGSTVAMHRQARGNFANDWARNKSITESDHTAVYRFDQTGKRLEGLQVLVANVLVAEFTEFRYDEEFPPSLFVSPVPA NASWETDAKPASVSFTGPKEAVVYFFDALAKEDWDAVLQVMQRSTVHPGVKSTYGGLQVISIGEAFQSGLYAGYFVPYQV RLRDGTVKSHKIAIRNDNPAHQWVVDGGY >Mature_349_residues MKNIAVENARKTSRPMWRWAAVACAAAALLLVLPLLPVKSTGVPLLAQSVQAMANVHTVHITGRIRTLPHDNFELIGTQY DFVPIEIWREFSTPPRWRVEKPGRVVVMDGQSSVLYFKTTNEAVKGTPNAGFLEWLRPLLDPQSILQNELAAARRGEARA AVSGSTVAMHRQARGNFANDWARNKSITESDHTAVYRFDQTGKRLEGLQVLVANVLVAEFTEFRYDEEFPPSLFVSPVPA NASWETDAKPASVSFTGPKEAVVYFFDALAKEDWDAVLQVMQRSTVHPGVKSTYGGLQVISIGEAFQSGLYAGYFVPYQV RLRDGTVKSHKIAIRNDNPAHQWVVDGGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38752; Mature: 38752
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIAVENARKTSRPMWRWAAVACAAAALLLVLPLLPVKSTGVPLLAQSVQAMANVHTVH CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEE ITGRIRTLPHDNFELIGTQYDFVPIEIWREFSTPPRWRVEKPGRVVVMDGQSSVLYFKTT EEEEEEECCCCCEEEEECCCCEEEHHHHHHCCCCCCEEECCCCEEEEECCCCCEEEEEEC NEAVKGTPNAGFLEWLRPLLDPQSILQNELAAARRGEARAAVSGSTVAMHRQARGNFAND CHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHCCCCCHH WARNKSITESDHTAVYRFDQTGKRLEGLQVLVANVLVAEFTEFRYDEEFPPSLFVSPVPA HHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC NASWETDAKPASVSFTGPKEAVVYFFDALAKEDWDAVLQVMQRSTVHPGVKSTYGGLQVI CCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHCCCCEEEE SIGEAFQSGLYAGYFVPYQVRLRDGTVKSHKIAIRNDNPAHQWVVDGGY EECHHHHCCCEEEEECEEEEEEECCCCEEEEEEEECCCCCEEEEECCCC >Mature Secondary Structure MKNIAVENARKTSRPMWRWAAVACAAAALLLVLPLLPVKSTGVPLLAQSVQAMANVHTVH CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEE ITGRIRTLPHDNFELIGTQYDFVPIEIWREFSTPPRWRVEKPGRVVVMDGQSSVLYFKTT EEEEEEECCCCCEEEEECCCCEEEHHHHHHCCCCCCEEECCCCEEEEECCCCCEEEEEEC NEAVKGTPNAGFLEWLRPLLDPQSILQNELAAARRGEARAAVSGSTVAMHRQARGNFAND CHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHCCCCCHH WARNKSITESDHTAVYRFDQTGKRLEGLQVLVANVLVAEFTEFRYDEEFPPSLFVSPVPA HHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC NASWETDAKPASVSFTGPKEAVVYFFDALAKEDWDAVLQVMQRSTVHPGVKSTYGGLQVI CCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHCCCCEEEE SIGEAFQSGLYAGYFVPYQVRLRDGTVKSHKIAIRNDNPAHQWVVDGGY EECHHHHCCCEEEEECEEEEEEECCCCEEEEEEEECCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA